List of
Perfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092431 | AGTC | 3 | 124 | 135 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 2. | NW_001092431 | TACC | 4 | 1216 | 1231 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 3. | NW_001092431 | GACG | 3 | 4337 | 4348 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 4. | NW_001092431 | TCCA | 3 | 7701 | 7712 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 5. | NW_001092431 | TACC | 3 | 13579 | 13590 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 6. | NW_001092431 | CTAC | 3 | 15241 | 15252 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 7. | NW_001092431 | ATAC | 3 | 20730 | 20741 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 8. | NW_001092431 | TTTG | 3 | 29836 | 29847 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 9. | NW_001092431 | GGGC | 3 | 32272 | 32283 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 10. | NW_001092431 | TTCC | 3 | 48510 | 48521 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 11. | NW_001092431 | TTCC | 3 | 49559 | 49570 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 12. | NW_001092431 | ACCT | 3 | 52590 | 52601 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 13. | NW_001092431 | TACC | 3 | 52674 | 52685 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 14. | NW_001092431 | TTCT | 3 | 55209 | 55220 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 85097012 |
| 15. | NW_001092431 | TGAG | 6 | 55653 | 55676 | 24 | 25.00% | 25.00% | 50.00% | 0.00% | 85097012 |
| 16. | NW_001092431 | AGAA | 3 | 56455 | 56466 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 17. | NW_001092431 | AGGT | 6 | 60073 | 60096 | 24 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 18. | NW_001092431 | GTTT | 3 | 60139 | 60150 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 19. | NW_001092431 | GGCA | 7 | 61725 | 61752 | 28 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 20. | NW_001092431 | CGTC | 3 | 66877 | 66888 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 21. | NW_001092431 | ATGG | 7 | 67713 | 67740 | 28 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 22. | NW_001092431 | GTGG | 3 | 67741 | 67752 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 23. | NW_001092431 | GTCG | 3 | 67870 | 67881 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 24. | NW_001092431 | TCGG | 3 | 67883 | 67894 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 25. | NW_001092431 | TATG | 3 | 70756 | 70767 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 26. | NW_001092431 | ATGT | 6 | 70769 | 70792 | 24 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 27. | NW_001092431 | GTAT | 6 | 70799 | 70822 | 24 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 28. | NW_001092431 | GTAT | 3 | 70831 | 70842 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 29. | NW_001092431 | CCAT | 3 | 72562 | 72573 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 30. | NW_001092431 | CCAT | 3 | 72643 | 72654 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 31. | NW_001092431 | CCAA | 3 | 85598 | 85609 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | 85097035 |
| 32. | NW_001092431 | CTAG | 4 | 88592 | 88607 | 16 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 33. | NW_001092431 | TTGC | 4 | 88724 | 88739 | 16 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 34. | NW_001092431 | TGAC | 4 | 94066 | 94081 | 16 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 35. | NW_001092431 | ACCG | 3 | 95487 | 95498 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 36. | NW_001092431 | CCTA | 4 | 96780 | 96795 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 37. | NW_001092431 | TACC | 5 | 106673 | 106692 | 20 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 38. | NW_001092431 | CCAT | 3 | 106818 | 106829 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 39. | NW_001092431 | CATC | 3 | 107603 | 107614 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 40. | NW_001092431 | CCAT | 6 | 107737 | 107760 | 24 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 41. | NW_001092431 | ATCG | 3 | 107798 | 107809 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 42. | NW_001092431 | GTTT | 3 | 111458 | 111469 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 43. | NW_001092431 | CAGT | 4 | 111546 | 111561 | 16 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |