List of
Imperfect Hexa
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092431 | CCGGTG | 3 | 1770 | 1787 | 18 | 0.00% | 16.67% | 50.00% | 33.33% | Non-Coding |
| 2. | NW_001092431 | TTATTT | 4 | 5864 | 5887 | 24 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092431 | TCATTT | 3 | 12699 | 12716 | 18 | 16.67% | 66.67% | 0.00% | 16.67% | Non-Coding |
| 4. | NW_001092431 | GAAAAA | 3 | 25873 | 25889 | 17 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 5. | NW_001092431 | TGCGAC | 7 | 32886 | 32927 | 42 | 16.67% | 16.67% | 33.33% | 33.33% | Non-Coding |
| 6. | NW_001092431 | TGCCGG | 4 | 36704 | 36727 | 24 | 0.00% | 16.67% | 50.00% | 33.33% | 85096995 |
| 7. | NW_001092431 | ATTAAT | 5 | 39338 | 39367 | 30 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001092431 | GGTCCG | 4 | 42449 | 42472 | 24 | 0.00% | 16.67% | 50.00% | 33.33% | 85096999 |
| 9. | NW_001092431 | CCAATC | 4 | 45384 | 45407 | 24 | 33.33% | 16.67% | 0.00% | 50.00% | 85096999 |
| 10. | NW_001092431 | CCAGTC | 6 | 45384 | 45419 | 36 | 16.67% | 16.67% | 16.67% | 50.00% | 85096999 |
| 11. | NW_001092431 | GCAACA | 4 | 45615 | 45638 | 24 | 50.00% | 0.00% | 16.67% | 33.33% | 85096999 |
| 12. | NW_001092431 | ATTGTC | 3 | 48489 | 48506 | 18 | 16.67% | 50.00% | 16.67% | 16.67% | Non-Coding |
| 13. | NW_001092431 | CTCAGC | 3 | 52774 | 52791 | 18 | 16.67% | 16.67% | 16.67% | 50.00% | Non-Coding |
| 14. | NW_001092431 | CATGGG | 4 | 53087 | 53110 | 24 | 16.67% | 16.67% | 50.00% | 16.67% | 85097012 |
| 15. | NW_001092431 | GGGGCA | 3 | 53673 | 53690 | 18 | 16.67% | 0.00% | 66.67% | 16.67% | 85097012 |
| 16. | NW_001092431 | TGGTGC | 5 | 54357 | 54386 | 30 | 0.00% | 33.33% | 50.00% | 16.67% | 85097012 |
| 17. | NW_001092431 | GGCAGG | 3 | 54931 | 54948 | 18 | 16.67% | 0.00% | 66.67% | 16.67% | 85097012 |
| 18. | NW_001092431 | TTTTTC | 3 | 56040 | 56057 | 18 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 19. | NW_001092431 | AAAAGG | 3 | 60443 | 60459 | 17 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 20. | NW_001092431 | ATCGTC | 3 | 65845 | 65862 | 18 | 16.67% | 33.33% | 16.67% | 33.33% | 85097020 |
| 21. | NW_001092431 | TTTTTG | 3 | 67031 | 67048 | 18 | 0.00% | 83.33% | 16.67% | 0.00% | Non-Coding |
| 22. | NW_001092431 | ATCACC | 4 | 72531 | 72554 | 24 | 33.33% | 16.67% | 0.00% | 50.00% | Non-Coding |
| 23. | NW_001092431 | GGACTC | 3 | 86012 | 86029 | 18 | 16.67% | 16.67% | 33.33% | 33.33% | 85097035 |
| 24. | NW_001092431 | GACTGA | 4 | 88474 | 88497 | 24 | 33.33% | 16.67% | 33.33% | 16.67% | Non-Coding |
| 25. | NW_001092431 | CAAGCC | 3 | 89363 | 89380 | 18 | 33.33% | 0.00% | 16.67% | 50.00% | Non-Coding |
| 26. | NW_001092431 | GTCCAA | 3 | 100831 | 100848 | 18 | 33.33% | 16.67% | 16.67% | 33.33% | 85097040 |
| 27. | NW_001092431 | GAAGGA | 3 | 106029 | 106046 | 18 | 50.00% | 0.00% | 50.00% | 0.00% | 85097046 |
| 28. | NW_001092431 | CAAAAA | 3 | 106882 | 106900 | 19 | 83.33% | 0.00% | 0.00% | 16.67% | Non-Coding |
| 29. | NW_001092431 | CCGTCC | 3 | 114395 | 114412 | 18 | 0.00% | 16.67% | 16.67% | 66.67% | 85097059 |
| 30. | NW_001092431 | TCGTTG | 4 | 115340 | 115363 | 24 | 0.00% | 50.00% | 33.33% | 16.67% | Non-Coding |
| 31. | NW_001092431 | ACGGAA | 4 | 122245 | 122268 | 24 | 50.00% | 0.00% | 33.33% | 16.67% | 85097065 |
| 32. | NW_001092431 | AACAAA | 3 | 123170 | 123187 | 18 | 83.33% | 0.00% | 0.00% | 16.67% | Non-Coding |