List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092430 | GGTC | 3 | 575 | 585 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 2. | NW_001092430 | CCCT | 3 | 3058 | 3069 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 3. | NW_001092430 | CCCA | 3 | 3511 | 3521 | 11 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 4. | NW_001092430 | ACCC | 3 | 6662 | 6672 | 11 | 25.00% | 0.00% | 0.00% | 75.00% | 85096821 |
| 5. | NW_001092430 | GACC | 4 | 8183 | 8198 | 16 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 6. | NW_001092430 | TGGA | 3 | 9218 | 9229 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 7. | NW_001092430 | ATGG | 8 | 10197 | 10227 | 31 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 8. | NW_001092430 | CATC | 3 | 15733 | 15743 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85096830 |
| 9. | NW_001092430 | GAGT | 3 | 17506 | 17518 | 13 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 10. | NW_001092430 | CTTT | 3 | 18532 | 18542 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 11. | NW_001092430 | GATC | 3 | 18700 | 18710 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 12. | NW_001092430 | ACCT | 3 | 23284 | 23295 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 13. | NW_001092430 | TCTA | 3 | 23431 | 23441 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 14. | NW_001092430 | TACC | 3 | 23755 | 23766 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 15. | NW_001092430 | CTAC | 4 | 24051 | 24066 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 16. | NW_001092430 | TACC | 3 | 24239 | 24250 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 17. | NW_001092430 | GAAG | 8 | 24857 | 24892 | 36 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 18. | NW_001092430 | TGGT | 4 | 24999 | 25013 | 15 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 19. | NW_001092430 | GGAA | 3 | 25205 | 25215 | 11 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 20. | NW_001092430 | TACC | 5 | 25680 | 25700 | 21 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 21. | NW_001092430 | TGAG | 9 | 26594 | 26629 | 36 | 25.00% | 25.00% | 50.00% | 0.00% | 85096844 |
| 22. | NW_001092430 | ACCA | 3 | 33193 | 33204 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | 85096848 |
| 23. | NW_001092430 | TAGT | 3 | 35563 | 35574 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 24. | NW_001092430 | TTAG | 3 | 35776 | 35787 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 25. | NW_001092430 | ATAG | 3 | 36306 | 36316 | 11 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 26. | NW_001092430 | GATT | 3 | 36544 | 36554 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 27. | NW_001092430 | ACTT | 3 | 36674 | 36685 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 28. | NW_001092430 | TAAA | 3 | 38734 | 38745 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 29. | NW_001092430 | ATTA | 3 | 38833 | 38844 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 30. | NW_001092430 | AAAT | 3 | 39807 | 39818 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 31. | NW_001092430 | CGTG | 3 | 41377 | 41388 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 32. | NW_001092430 | CTCC | 5 | 41537 | 41556 | 20 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 33. | NW_001092430 | CCCA | 4 | 41664 | 41679 | 16 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 34. | NW_001092430 | CCAA | 3 | 41770 | 41781 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 35. | NW_001092430 | TCGC | 3 | 46091 | 46102 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | 85096857 |
| 36. | NW_001092430 | AGGG | 3 | 51827 | 51837 | 11 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 37. | NW_001092430 | AAAG | 3 | 51862 | 51873 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 38. | NW_001092430 | CCAA | 3 | 52436 | 52446 | 11 | 50.00% | 0.00% | 0.00% | 50.00% | 85096865 |
| 39. | NW_001092430 | TTTG | 3 | 57632 | 57644 | 13 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 40. | NW_001092430 | AGGG | 3 | 59023 | 59035 | 13 | 25.00% | 0.00% | 75.00% | 0.00% | 85096874 |
| 41. | NW_001092430 | CATC | 3 | 62359 | 62373 | 15 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 42. | NW_001092430 | AGGG | 3 | 62671 | 62682 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 43. | NW_001092430 | GAAG | 3 | 63031 | 63042 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 44. | NW_001092430 | GGTA | 4 | 66325 | 66340 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 45. | NW_001092430 | TCTT | 26 | 66608 | 66710 | 103 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 46. | NW_001092430 | TAGG | 5 | 67509 | 67528 | 20 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 47. | NW_001092430 | GGTA | 22 | 67637 | 67724 | 88 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 48. | NW_001092430 | CATC | 3 | 70422 | 70432 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85096882 |
| 49. | NW_001092430 | TTTG | 3 | 71080 | 71090 | 11 | 0.00% | 75.00% | 25.00% | 0.00% | 85096882 |
| 50. | NW_001092430 | CCTT | 3 | 76805 | 76816 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 51. | NW_001092430 | CTTC | 3 | 77146 | 77156 | 11 | 0.00% | 50.00% | 0.00% | 50.00% | 85096890 |
| 52. | NW_001092430 | TCGC | 3 | 77342 | 77352 | 11 | 0.00% | 25.00% | 25.00% | 50.00% | 85096890 |
| 53. | NW_001092430 | CCAT | 3 | 78323 | 78333 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 54. | NW_001092430 | TGCT | 3 | 78722 | 78733 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 55. | NW_001092430 | CCTT | 3 | 78995 | 79005 | 11 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 56. | NW_001092430 | GGCA | 3 | 85333 | 85343 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | 85096902 |
| 57. | NW_001092430 | CGTC | 3 | 88450 | 88462 | 13 | 0.00% | 25.00% | 25.00% | 50.00% | 85096905 |
| 58. | NW_001092430 | GACC | 3 | 89269 | 89279 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85096905 |
| 59. | NW_001092430 | GCAA | 3 | 91621 | 91632 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 60. | NW_001092430 | GGCG | 4 | 91674 | 91689 | 16 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 61. | NW_001092430 | GTAG | 3 | 92113 | 92123 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 62. | NW_001092430 | ACCT | 3 | 93576 | 93588 | 13 | 25.00% | 25.00% | 0.00% | 50.00% | 85096910 |
| 63. | NW_001092430 | ACCC | 3 | 94587 | 94597 | 11 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 64. | NW_001092430 | GGGA | 3 | 96459 | 96470 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 85096914 |
| 65. | NW_001092430 | ACTC | 3 | 97073 | 97083 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 66. | NW_001092430 | GAGG | 3 | 97132 | 97142 | 11 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 67. | NW_001092430 | AGGA | 3 | 98370 | 98381 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |