List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092426 | TTC | 4 | 168 | 179 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 2. | NW_001092426 | ATC | 4 | 1858 | 1870 | 13 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 3. | NW_001092426 | ATG | 4 | 3508 | 3518 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 4. | NW_001092426 | TTG | 4 | 3521 | 3532 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 5. | NW_001092426 | TTC | 4 | 3626 | 3637 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 6. | NW_001092426 | CGC | 4 | 3739 | 3750 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 7. | NW_001092426 | TCC | 4 | 3906 | 3917 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 8. | NW_001092426 | CCG | 5 | 4278 | 4292 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 85096309 |
| 9. | NW_001092426 | TGA | 4 | 4997 | 5008 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85096309 |
| 10. | NW_001092426 | GCG | 4 | 5335 | 5346 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85096309 |
| 11. | NW_001092426 | ACT | 4 | 7266 | 7277 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 12. | NW_001092426 | TCG | 4 | 7709 | 7720 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 13. | NW_001092426 | GGC | 4 | 10181 | 10192 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 14. | NW_001092426 | TAA | 4 | 10481 | 10492 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 15. | NW_001092426 | GTC | 5 | 12512 | 12525 | 14 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 16. | NW_001092426 | CAA | 4 | 13876 | 13888 | 13 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 17. | NW_001092426 | AAC | 4 | 14382 | 14393 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 18. | NW_001092426 | TTC | 4 | 15999 | 16010 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 19. | NW_001092426 | AGG | 4 | 18149 | 18160 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 20. | NW_001092426 | AGA | 6 | 18271 | 18287 | 17 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 21. | NW_001092426 | CCT | 4 | 19033 | 19044 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85096331 |
| 22. | NW_001092426 | CTT | 5 | 19139 | 19153 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85096331 |
| 23. | NW_001092426 | ACT | 4 | 20726 | 20736 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 24. | NW_001092426 | CAT | 4 | 21216 | 21226 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 25. | NW_001092426 | TTC | 4 | 22301 | 22311 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 26. | NW_001092426 | CCT | 4 | 22681 | 22692 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 27. | NW_001092426 | AGG | 5 | 23300 | 23314 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85096335 |
| 28. | NW_001092426 | GGA | 4 | 23316 | 23327 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85096335 |
| 29. | NW_001092426 | TGG | 4 | 23719 | 23730 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85096335 |
| 30. | NW_001092426 | AGA | 4 | 25884 | 25895 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 31. | NW_001092426 | AAC | 5 | 27037 | 27051 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 32. | NW_001092426 | TGA | 4 | 27217 | 27227 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 33. | NW_001092426 | GTT | 7 | 28269 | 28289 | 21 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 34. | NW_001092426 | ACC | 4 | 28784 | 28795 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 35. | NW_001092426 | CGC | 4 | 29822 | 29833 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85096339 |
| 36. | NW_001092426 | AGA | 5 | 35618 | 35632 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 37. | NW_001092426 | ATG | 5 | 35699 | 35713 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 38. | NW_001092426 | GAA | 7 | 35713 | 35733 | 21 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 39. | NW_001092426 | TCA | 4 | 36457 | 36468 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 40. | NW_001092426 | CGG | 4 | 40456 | 40467 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85096352 |
| 41. | NW_001092426 | CAC | 5 | 40471 | 40485 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85096352 |
| 42. | NW_001092426 | GAG | 4 | 41239 | 41250 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85096352 |
| 43. | NW_001092426 | GCT | 5 | 41498 | 41512 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85096352 |
| 44. | NW_001092426 | GAG | 4 | 41513 | 41523 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85096352 |
| 45. | NW_001092426 | CGA | 5 | 41680 | 41694 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85096352 |
| 46. | NW_001092426 | CAT | 4 | 48062 | 48072 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85096356 |
| 47. | NW_001092426 | CAG | 5 | 48661 | 48675 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85096356 |
| 48. | NW_001092426 | TCA | 4 | 49205 | 49216 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 49. | NW_001092426 | ACT | 4 | 50690 | 50700 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 50. | NW_001092426 | CAC | 5 | 50856 | 50870 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 51. | NW_001092426 | AGA | 15 | 51105 | 51149 | 45 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 52. | NW_001092426 | GAA | 5 | 51228 | 51242 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 53. | NW_001092426 | GTG | 4 | 52853 | 52865 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 54. | NW_001092426 | CCA | 4 | 56404 | 56414 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 55. | NW_001092426 | CCG | 4 | 56792 | 56803 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 56. | NW_001092426 | AAC | 4 | 56886 | 56897 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 57. | NW_001092426 | AAC | 4 | 57413 | 57423 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 58. | NW_001092426 | ATA | 4 | 58351 | 58362 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 59. | NW_001092426 | ATA | 4 | 58614 | 58625 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 60. | NW_001092426 | ATA | 4 | 58635 | 58646 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 61. | NW_001092426 | GTA | 4 | 58644 | 58654 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 62. | NW_001092426 | GAG | 4 | 58982 | 58993 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 63. | NW_001092426 | TAG | 4 | 59153 | 59165 | 13 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 64. | NW_001092426 | CTA | 4 | 59219 | 59229 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 65. | NW_001092426 | GTA | 4 | 60167 | 60177 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 66. | NW_001092426 | AGT | 4 | 60616 | 60626 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 67. | NW_001092426 | AGT | 11 | 62296 | 62326 | 31 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 68. | NW_001092426 | CTT | 4 | 62859 | 62870 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 69. | NW_001092426 | CTT | 8 | 63049 | 63072 | 24 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 70. | NW_001092426 | GTC | 4 | 63740 | 63751 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 71. | NW_001092426 | CAC | 4 | 63858 | 63869 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 72. | NW_001092426 | ATC | 4 | 66482 | 66493 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 73. | NW_001092426 | CGG | 4 | 67333 | 67343 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 74. | NW_001092426 | TCA | 4 | 68288 | 68299 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 75. | NW_001092426 | TGC | 4 | 68784 | 68795 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 76. | NW_001092426 | ACG | 10 | 69960 | 69989 | 30 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 77. | NW_001092426 | TGC | 4 | 71457 | 71468 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85096371 |
| 78. | NW_001092426 | AAG | 4 | 71596 | 71607 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85096371 |
| 79. | NW_001092426 | GAG | 4 | 71632 | 71643 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85096371 |
| 80. | NW_001092426 | TGA | 4 | 72026 | 72036 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85096371 |
| 81. | NW_001092426 | GAC | 4 | 72316 | 72327 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85096371 |
| 82. | NW_001092426 | CAG | 4 | 73207 | 73217 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 83. | NW_001092426 | GTT | 4 | 73630 | 73640 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 84. | NW_001092426 | CTT | 4 | 73756 | 73766 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |