List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092426 | CCAA | 3 | 1698 | 1708 | 11 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 2. | NW_001092426 | CAAT | 3 | 4438 | 4448 | 11 | 50.00% | 25.00% | 0.00% | 25.00% | 85096309 |
| 3. | NW_001092426 | TTCC | 3 | 4460 | 4471 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 85096309 |
| 4. | NW_001092426 | GAAG | 3 | 6498 | 6510 | 13 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 5. | NW_001092426 | AAAG | 3 | 10240 | 10250 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 6. | NW_001092426 | AAGG | 3 | 10251 | 10263 | 13 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 7. | NW_001092426 | AGCG | 3 | 13125 | 13135 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | 85096322 |
| 8. | NW_001092426 | GTAC | 3 | 14446 | 14457 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 9. | NW_001092426 | AAGG | 3 | 15343 | 15353 | 11 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 10. | NW_001092426 | CCTA | 3 | 16634 | 16645 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85096326 |
| 11. | NW_001092426 | TATC | 3 | 17731 | 17742 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 12. | NW_001092426 | CTAC | 3 | 20672 | 20683 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 13. | NW_001092426 | AAGT | 3 | 24000 | 24010 | 11 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 14. | NW_001092426 | CAAA | 3 | 24927 | 24937 | 11 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 15. | NW_001092426 | GTGA | 3 | 26114 | 26124 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 16. | NW_001092426 | CCCT | 4 | 33786 | 33800 | 15 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 17. | NW_001092426 | TGGA | 3 | 35213 | 35224 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 18. | NW_001092426 | GAAA | 3 | 36121 | 36132 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 19. | NW_001092426 | CCGT | 3 | 38502 | 38512 | 11 | 0.00% | 25.00% | 25.00% | 50.00% | 85096347 |
| 20. | NW_001092426 | CTTC | 4 | 42029 | 42043 | 15 | 0.00% | 50.00% | 0.00% | 50.00% | 85096352 |
| 21. | NW_001092426 | CAAC | 3 | 42111 | 42121 | 11 | 50.00% | 0.00% | 0.00% | 50.00% | 85096352 |
| 22. | NW_001092426 | GGGA | 3 | 42498 | 42509 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 85096352 |
| 23. | NW_001092426 | TACC | 3 | 43404 | 43415 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 24. | NW_001092426 | GCCA | 3 | 43537 | 43548 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 25. | NW_001092426 | AGGA | 3 | 43763 | 43774 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 26. | NW_001092426 | CAGG | 6 | 44106 | 44129 | 24 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 27. | NW_001092426 | GAAG | 3 | 44820 | 44831 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 28. | NW_001092426 | CCTT | 4 | 46984 | 46999 | 16 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 29. | NW_001092426 | ACCT | 4 | 49833 | 49849 | 17 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 30. | NW_001092426 | TAGG | 4 | 51510 | 51525 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 31. | NW_001092426 | GTCT | 6 | 51822 | 51845 | 24 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 32. | NW_001092426 | CTTT | 3 | 51968 | 51978 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 33. | NW_001092426 | TACC | 4 | 53807 | 53821 | 15 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 34. | NW_001092426 | TGGC | 3 | 55344 | 55355 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 35. | NW_001092426 | ATTT | 3 | 55464 | 55474 | 11 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 36. | NW_001092426 | ACCA | 7 | 56181 | 56208 | 28 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 37. | NW_001092426 | CCGT | 3 | 56423 | 56434 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 38. | NW_001092426 | TCCA | 3 | 57345 | 57356 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 39. | NW_001092426 | ATTT | 3 | 57910 | 57921 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 40. | NW_001092426 | TTAA | 3 | 59705 | 59716 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 41. | NW_001092426 | TTGG | 3 | 61260 | 61271 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 42. | NW_001092426 | GAAA | 3 | 63893 | 63903 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 43. | NW_001092426 | CGAA | 3 | 64372 | 64382 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 44. | NW_001092426 | CGTC | 5 | 64650 | 64673 | 24 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 45. | NW_001092426 | CGTG | 3 | 65214 | 65226 | 13 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 46. | NW_001092426 | CGAC | 4 | 65892 | 65907 | 16 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 47. | NW_001092426 | GAAA | 3 | 66304 | 66315 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 48. | NW_001092426 | TGAA | 5 | 66512 | 66531 | 20 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 49. | NW_001092426 | TGAG | 3 | 69050 | 69061 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 50. | NW_001092426 | TGAC | 4 | 69117 | 69132 | 16 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 51. | NW_001092426 | GTTT | 3 | 72569 | 72580 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 52. | NW_001092426 | AGCG | 5 | 73272 | 73295 | 24 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |