List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092422 | TAA | 4 | 655 | 666 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092422 | ATA | 5 | 1448 | 1463 | 16 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092422 | TTA | 4 | 1500 | 1510 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092422 | TTA | 4 | 1620 | 1632 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 5. | NW_001092422 | ATT | 4 | 1873 | 1884 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092422 | ACT | 4 | 2697 | 2708 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 7. | NW_001092422 | CTT | 4 | 7187 | 7198 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 8. | NW_001092422 | CAC | 4 | 7665 | 7676 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 9. | NW_001092422 | TCC | 4 | 7977 | 7988 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 10. | NW_001092422 | CGA | 4 | 8360 | 8371 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85095968 |
| 11. | NW_001092422 | AAG | 4 | 10218 | 10229 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85095968 |
| 12. | NW_001092422 | AAC | 4 | 10858 | 10869 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85095968 |
| 13. | NW_001092422 | AGC | 5 | 11155 | 11169 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 14. | NW_001092422 | GAG | 5 | 11178 | 11192 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 15. | NW_001092422 | CTT | 4 | 11567 | 11578 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 16. | NW_001092422 | ATG | 4 | 11839 | 11849 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 17. | NW_001092422 | CTT | 4 | 13723 | 13734 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85095972 |
| 18. | NW_001092422 | CAG | 4 | 15024 | 15034 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85095972 |
| 19. | NW_001092422 | GTG | 4 | 15140 | 15151 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85095972 |
| 20. | NW_001092422 | TCT | 12 | 16485 | 16519 | 35 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 21. | NW_001092422 | TTC | 4 | 16522 | 16532 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 22. | NW_001092422 | CCA | 5 | 16618 | 16632 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 23. | NW_001092422 | GTT | 5 | 17676 | 17690 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85095977 |
| 24. | NW_001092422 | CTT | 4 | 19178 | 19189 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85095985 |
| 25. | NW_001092422 | TCC | 4 | 19326 | 19337 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85095985 |
| 26. | NW_001092422 | ATT | 4 | 19825 | 19835 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | 85095985 |
| 27. | NW_001092422 | TGT | 4 | 20402 | 20413 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 28. | NW_001092422 | GTG | 4 | 22500 | 22511 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 29. | NW_001092422 | CAA | 5 | 24024 | 24039 | 16 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 30. | NW_001092422 | CGT | 4 | 24208 | 24219 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 31. | NW_001092422 | CCG | 5 | 24384 | 24397 | 14 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 32. | NW_001092422 | CTG | 5 | 26084 | 26098 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85095994 |
| 33. | NW_001092422 | GCC | 5 | 26340 | 26355 | 16 | 0.00% | 0.00% | 33.33% | 66.67% | 85095994 |
| 34. | NW_001092422 | ACG | 4 | 26893 | 26904 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85095994 |
| 35. | NW_001092422 | GCA | 4 | 29148 | 29159 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85095994 |
| 36. | NW_001092422 | AGC | 4 | 29585 | 29596 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85095994 |
| 37. | NW_001092422 | GGA | 4 | 29834 | 29845 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85095994 |
| 38. | NW_001092422 | GAA | 4 | 31092 | 31103 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85095994 |
| 39. | NW_001092422 | GGT | 5 | 32762 | 32776 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 40. | NW_001092422 | TGA | 4 | 33104 | 33115 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 41. | NW_001092422 | CCA | 7 | 33209 | 33229 | 21 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 42. | NW_001092422 | ACC | 4 | 33394 | 33405 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 43. | NW_001092422 | ACG | 4 | 33935 | 33946 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85095997 |
| 44. | NW_001092422 | CCG | 4 | 35165 | 35177 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | 85095997 |
| 45. | NW_001092422 | GAA | 9 | 35251 | 35277 | 27 | 66.67% | 0.00% | 33.33% | 0.00% | 85095997 |
| 46. | NW_001092422 | TCT | 4 | 37114 | 37125 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85095997 |
| 47. | NW_001092422 | AGA | 4 | 37729 | 37740 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 48. | NW_001092422 | TAT | 4 | 37778 | 37788 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 49. | NW_001092422 | CGT | 5 | 38055 | 38069 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85096002 |
| 50. | NW_001092422 | AGT | 4 | 38136 | 38147 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85096002 |
| 51. | NW_001092422 | GTG | 4 | 38176 | 38187 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85096002 |
| 52. | NW_001092422 | TGT | 6 | 38258 | 38275 | 18 | 0.00% | 66.67% | 33.33% | 0.00% | 85096002 |
| 53. | NW_001092422 | TGC | 4 | 38304 | 38315 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85096002 |
| 54. | NW_001092422 | GAG | 7 | 38319 | 38339 | 21 | 33.33% | 0.00% | 66.67% | 0.00% | 85096002 |
| 55. | NW_001092422 | GTT | 4 | 38486 | 38498 | 13 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 56. | NW_001092422 | TCA | 4 | 38714 | 38725 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 57. | NW_001092422 | CTA | 4 | 39510 | 39520 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 58. | NW_001092422 | TAA | 4 | 39616 | 39627 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 59. | NW_001092422 | TAC | 4 | 40079 | 40092 | 14 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 60. | NW_001092422 | AAT | 4 | 40161 | 40171 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 61. | NW_001092422 | TAT | 4 | 40220 | 40231 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |