List of
Imperfect Hexa
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092401 | CGTCTG | 3 | 146 | 163 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 85094490 |
| 2. | NW_001092401 | GGTTGC | 3 | 278 | 301 | 24 | 0.00% | 33.33% | 50.00% | 16.67% | 85094490 |
| 3. | NW_001092401 | ATGTCG | 3 | 2251 | 2268 | 18 | 16.67% | 33.33% | 33.33% | 16.67% | 85094490 |
| 4. | NW_001092401 | GCGGAT | 3 | 4152 | 4169 | 18 | 16.67% | 16.67% | 50.00% | 16.67% | Non-Coding |
| 5. | NW_001092401 | AGTAGC | 4 | 5487 | 5510 | 24 | 33.33% | 16.67% | 33.33% | 16.67% | 85094494 |
| 6. | NW_001092401 | GGTTTT | 4 | 7727 | 7750 | 24 | 0.00% | 66.67% | 33.33% | 0.00% | 85094494 |
| 7. | NW_001092401 | GCACTG | 7 | 14487 | 14528 | 42 | 16.67% | 16.67% | 33.33% | 33.33% | 85094502 |
| 8. | NW_001092401 | CAGTTC | 3 | 14728 | 14745 | 18 | 16.67% | 33.33% | 16.67% | 33.33% | 85094502 |
| 9. | NW_001092401 | ACTCCA | 3 | 14748 | 14765 | 18 | 33.33% | 16.67% | 0.00% | 50.00% | 85094502 |
| 10. | NW_001092401 | AGCACC | 4 | 16368 | 16391 | 24 | 33.33% | 0.00% | 16.67% | 50.00% | 85094502 |
| 11. | NW_001092401 | GAACCC | 3 | 41909 | 41926 | 18 | 33.33% | 0.00% | 16.67% | 50.00% | Non-Coding |
| 12. | NW_001092401 | TTATCG | 3 | 42071 | 42088 | 18 | 16.67% | 50.00% | 16.67% | 16.67% | Non-Coding |
| 13. | NW_001092401 | CTCACT | 4 | 45747 | 45770 | 24 | 16.67% | 33.33% | 0.00% | 50.00% | 85094539 |
| 14. | NW_001092401 | CAAGCT | 3 | 51959 | 51977 | 19 | 33.33% | 16.67% | 16.67% | 33.33% | 85094546 |
| 15. | NW_001092401 | CGGGCG | 3 | 56364 | 56381 | 18 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 16. | NW_001092401 | CTTCCA | 3 | 57031 | 57048 | 18 | 16.67% | 33.33% | 0.00% | 50.00% | 85094554 |
| 17. | NW_001092401 | TGTACC | 3 | 74355 | 74372 | 18 | 16.67% | 33.33% | 16.67% | 33.33% | Non-Coding |
| 18. | NW_001092401 | CAGTAT | 3 | 74850 | 74867 | 18 | 33.33% | 33.33% | 16.67% | 16.67% | Non-Coding |
| 19. | NW_001092401 | CCCTCT | 3 | 86416 | 86433 | 18 | 0.00% | 33.33% | 0.00% | 66.67% | 85094590 |
| 20. | NW_001092401 | AGGAAC | 3 | 89098 | 89115 | 18 | 50.00% | 0.00% | 33.33% | 16.67% | 85094594 |
| 21. | NW_001092401 | AGTGCG | 3 | 92430 | 92448 | 19 | 16.67% | 16.67% | 50.00% | 16.67% | Non-Coding |
| 22. | NW_001092401 | CCGCCC | 3 | 97230 | 97248 | 19 | 0.00% | 0.00% | 16.67% | 83.33% | Non-Coding |
| 23. | NW_001092401 | TGCCCA | 3 | 108675 | 108691 | 17 | 16.67% | 16.67% | 16.67% | 50.00% | Non-Coding |
| 24. | NW_001092401 | TACGGC | 4 | 110356 | 110379 | 24 | 16.67% | 16.67% | 33.33% | 33.33% | 85094615 |
| 25. | NW_001092401 | CAAAAA | 3 | 129833 | 129850 | 18 | 83.33% | 0.00% | 0.00% | 16.67% | Non-Coding |
| 26. | NW_001092401 | AGCCAA | 3 | 143705 | 143723 | 19 | 50.00% | 0.00% | 16.67% | 33.33% | 85094653 |
| 27. | NW_001092401 | GGTCGG | 3 | 152156 | 152173 | 18 | 0.00% | 16.67% | 66.67% | 16.67% | 85094661 |
| 28. | NW_001092401 | TCCATC | 4 | 173948 | 173971 | 24 | 16.67% | 33.33% | 0.00% | 50.00% | Non-Coding |
| 29. | NW_001092401 | CCGAGG | 3 | 182212 | 182228 | 17 | 16.67% | 0.00% | 50.00% | 33.33% | 85094693 |
| 30. | NW_001092401 | TGGCCG | 3 | 212251 | 212268 | 18 | 0.00% | 16.67% | 50.00% | 33.33% | 85094739 |
| 31. | NW_001092401 | AAAAAT | 3 | 213697 | 213715 | 19 | 83.33% | 16.67% | 0.00% | 0.00% | Non-Coding |
| 32. | NW_001092401 | CTTTTT | 3 | 219099 | 219117 | 19 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |