List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092396 | TTAC | 3 | 198 | 210 | 13 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 2. | NW_001092396 | CCTA | 3 | 296 | 306 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 3. | NW_001092396 | TATT | 3 | 3948 | 3959 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092396 | TGGC | 3 | 4457 | 4467 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 5. | NW_001092396 | GTAT | 3 | 9007 | 9017 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 6. | NW_001092396 | GAAA | 3 | 17162 | 17173 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 7. | NW_001092396 | CCCA | 3 | 17369 | 17381 | 13 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 8. | NW_001092396 | CGGG | 3 | 20157 | 20167 | 11 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 9. | NW_001092396 | TATC | 3 | 20608 | 20618 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 10. | NW_001092396 | GGAA | 3 | 21410 | 21421 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 11. | NW_001092396 | TGCA | 3 | 24422 | 24432 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 12. | NW_001092396 | GCAC | 3 | 24754 | 24764 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 13. | NW_001092396 | TACC | 3 | 31469 | 31480 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85093748 |
| 14. | NW_001092396 | GTTC | 3 | 41933 | 41943 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | 85093756 |
| 15. | NW_001092396 | TGCA | 3 | 43734 | 43744 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 85093756 |
| 16. | NW_001092396 | GCTG | 4 | 45249 | 45263 | 15 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 17. | NW_001092396 | CTCC | 3 | 48494 | 48505 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 18. | NW_001092396 | TTTC | 3 | 49107 | 49118 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 85093760 |
| 19. | NW_001092396 | CTCC | 8 | 52268 | 52300 | 33 | 0.00% | 25.00% | 0.00% | 75.00% | 85093763 |
| 20. | NW_001092396 | GAGG | 4 | 52740 | 52755 | 16 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 21. | NW_001092396 | TGTT | 3 | 52791 | 52801 | 11 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 22. | NW_001092396 | GGAA | 4 | 53995 | 54009 | 15 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 23. | NW_001092396 | GGGT | 3 | 56900 | 56910 | 11 | 0.00% | 25.00% | 75.00% | 0.00% | 85093771 |
| 24. | NW_001092396 | GCGG | 3 | 57210 | 57220 | 11 | 0.00% | 0.00% | 75.00% | 25.00% | 85093771 |
| 25. | NW_001092396 | ACAA | 4 | 58785 | 58800 | 16 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 26. | NW_001092396 | CATT | 3 | 59565 | 59575 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 27. | NW_001092396 | CAAA | 3 | 63483 | 63493 | 11 | 75.00% | 0.00% | 0.00% | 25.00% | 85093779 |
| 28. | NW_001092396 | ATGC | 3 | 65108 | 65118 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 29. | NW_001092396 | GCCG | 3 | 69903 | 69914 | 12 | 0.00% | 0.00% | 50.00% | 50.00% | 85093791 |
| 30. | NW_001092396 | TACC | 3 | 69928 | 69939 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85093791 |
| 31. | NW_001092396 | AAAC | 3 | 71376 | 71388 | 13 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |