List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092393 | AGA | 4 | 4492 | 4502 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 2. | NW_001092393 | ATG | 4 | 4566 | 4576 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 3. | NW_001092393 | GAC | 4 | 4680 | 4690 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 4. | NW_001092393 | AAG | 4 | 5832 | 5843 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85093396 |
| 5. | NW_001092393 | ACA | 4 | 7601 | 7612 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 6. | NW_001092393 | GTC | 4 | 7813 | 7823 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85093400 |
| 7. | NW_001092393 | GTG | 4 | 8553 | 8564 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85093400 |
| 8. | NW_001092393 | CGC | 4 | 10946 | 10956 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 85093404 |
| 9. | NW_001092393 | GAG | 4 | 12394 | 12405 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85093404 |
| 10. | NW_001092393 | GAG | 4 | 12501 | 12512 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85093404 |
| 11. | NW_001092393 | GTG | 4 | 13583 | 13594 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 12. | NW_001092393 | GTT | 4 | 17621 | 17631 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 13. | NW_001092393 | CGT | 4 | 17811 | 17822 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 14. | NW_001092393 | ACC | 4 | 18293 | 18304 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 15. | NW_001092393 | CTG | 4 | 19357 | 19368 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85093411 |
| 16. | NW_001092393 | CAC | 4 | 19607 | 19618 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85093411 |
| 17. | NW_001092393 | CAT | 4 | 20489 | 20500 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 18. | NW_001092393 | TGC | 4 | 22154 | 22164 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85093415 |
| 19. | NW_001092393 | TGA | 4 | 22669 | 22682 | 14 | 33.33% | 33.33% | 33.33% | 0.00% | 85093415 |
| 20. | NW_001092393 | TGG | 6 | 22684 | 22701 | 18 | 0.00% | 33.33% | 66.67% | 0.00% | 85093415 |
| 21. | NW_001092393 | GTG | 4 | 22704 | 22715 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85093415 |
| 22. | NW_001092393 | AGG | 5 | 23080 | 23094 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85093415 |
| 23. | NW_001092393 | TTG | 5 | 23272 | 23286 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85093415 |
| 24. | NW_001092393 | CGA | 4 | 24238 | 24248 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 25. | NW_001092393 | TCT | 5 | 25132 | 25146 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 26. | NW_001092393 | AAG | 4 | 25312 | 25323 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 27. | NW_001092393 | CAA | 4 | 27066 | 27076 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | 85093418 |
| 28. | NW_001092393 | CTT | 4 | 27858 | 27872 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 29. | NW_001092393 | CAC | 4 | 27901 | 27912 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 30. | NW_001092393 | AAG | 4 | 28097 | 28107 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 31. | NW_001092393 | CAA | 4 | 28959 | 28969 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 32. | NW_001092393 | CAC | 11 | 29274 | 29305 | 32 | 33.33% | 0.00% | 0.00% | 66.67% | 85093422 |
| 33. | NW_001092393 | GGC | 4 | 32016 | 32027 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85093426 |
| 34. | NW_001092393 | ATT | 4 | 32984 | 32995 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 35. | NW_001092393 | CAT | 7 | 33158 | 33178 | 21 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 36. | NW_001092393 | TCT | 4 | 34598 | 34609 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85093430 |
| 37. | NW_001092393 | GTG | 12 | 35090 | 35125 | 36 | 0.00% | 33.33% | 66.67% | 0.00% | 85093430 |
| 38. | NW_001092393 | GCA | 4 | 35149 | 35160 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85093430 |
| 39. | NW_001092393 | GTC | 4 | 40526 | 40537 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85093437 |
| 40. | NW_001092393 | TGG | 4 | 40771 | 40782 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85093437 |
| 41. | NW_001092393 | CCA | 9 | 53296 | 53322 | 27 | 33.33% | 0.00% | 0.00% | 66.67% | 85093449 |
| 42. | NW_001092393 | CTG | 7 | 54937 | 54957 | 21 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 43. | NW_001092393 | TCG | 5 | 56025 | 56039 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85093453 |
| 44. | NW_001092393 | GTC | 4 | 56769 | 56780 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85093457 |
| 45. | NW_001092393 | CCT | 4 | 57076 | 57087 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85093457 |
| 46. | NW_001092393 | TCT | 5 | 57154 | 57167 | 14 | 0.00% | 66.67% | 0.00% | 33.33% | 85093457 |
| 47. | NW_001092393 | TGT | 4 | 62397 | 62408 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 48. | NW_001092393 | TTA | 4 | 64463 | 64474 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 49. | NW_001092393 | TAT | 4 | 64509 | 64520 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 50. | NW_001092393 | TAT | 4 | 65778 | 65789 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 51. | NW_001092393 | TAT | 4 | 66059 | 66070 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 52. | NW_001092393 | TAT | 5 | 66444 | 66458 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 53. | NW_001092393 | CTA | 4 | 66756 | 66767 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |