List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092393 | CCCA | 3 | 4973 | 4983 | 11 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 2. | NW_001092393 | GCAA | 3 | 6281 | 6291 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | 85093396 |
| 3. | NW_001092393 | GCTG | 4 | 8603 | 8618 | 16 | 0.00% | 25.00% | 50.00% | 25.00% | 85093400 |
| 4. | NW_001092393 | ACCT | 3 | 10483 | 10494 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 5. | NW_001092393 | TTTC | 3 | 10604 | 10614 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 6. | NW_001092393 | CGAA | 3 | 12143 | 12153 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | 85093404 |
| 7. | NW_001092393 | AAGG | 3 | 12185 | 12195 | 11 | 50.00% | 0.00% | 50.00% | 0.00% | 85093404 |
| 8. | NW_001092393 | TCTA | 3 | 12619 | 12631 | 13 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 9. | NW_001092393 | CTTT | 3 | 15231 | 15241 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 10. | NW_001092393 | CCAT | 3 | 17387 | 17398 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 11. | NW_001092393 | GACG | 3 | 23597 | 23607 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | 85093415 |
| 12. | NW_001092393 | AACC | 3 | 24100 | 24110 | 11 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 13. | NW_001092393 | GATC | 3 | 26355 | 26366 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 14. | NW_001092393 | GTCT | 3 | 29910 | 29920 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 15. | NW_001092393 | TAGG | 4 | 30406 | 30422 | 17 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 16. | NW_001092393 | CGAA | 3 | 36702 | 36712 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 17. | NW_001092393 | TAGG | 3 | 36835 | 36850 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 18. | NW_001092393 | TGAC | 3 | 37007 | 37017 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 19. | NW_001092393 | GAGG | 3 | 40595 | 40606 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 85093437 |
| 20. | NW_001092393 | TGCA | 3 | 46439 | 46450 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 21. | NW_001092393 | TAGT | 3 | 48478 | 48489 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | 85093441 |
| 22. | NW_001092393 | TTGA | 3 | 48763 | 48773 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | 85093441 |
| 23. | NW_001092393 | AAGT | 3 | 54134 | 54145 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | 85093449 |
| 24. | NW_001092393 | ACTA | 3 | 57044 | 57055 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | 85093457 |
| 25. | NW_001092393 | GACA | 3 | 58117 | 58128 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 26. | NW_001092393 | AAGG | 3 | 59753 | 59764 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 27. | NW_001092393 | AGGT | 3 | 60944 | 60954 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 28. | NW_001092393 | GAAA | 3 | 64282 | 64292 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 29. | NW_001092393 | TAAT | 4 | 64944 | 64960 | 17 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 30. | NW_001092393 | ATAA | 4 | 64961 | 64976 | 16 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |