List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092392 | AAT | 4 | 787 | 797 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092392 | ACT | 4 | 913 | 923 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 3. | NW_001092392 | AAT | 4 | 1094 | 1106 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092392 | TTA | 4 | 1958 | 1970 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 5. | NW_001092392 | TAT | 4 | 2486 | 2498 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092392 | GAA | 4 | 3063 | 3074 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 7. | NW_001092392 | TCA | 4 | 5035 | 5045 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 8. | NW_001092392 | ATG | 4 | 9429 | 9440 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85093315 |
| 9. | NW_001092392 | GAG | 7 | 9481 | 9500 | 20 | 33.33% | 0.00% | 66.67% | 0.00% | 85093315 |
| 10. | NW_001092392 | AAT | 4 | 10676 | 10687 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 11. | NW_001092392 | ATA | 4 | 11487 | 11497 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001092392 | TTG | 6 | 12992 | 13012 | 21 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 13. | NW_001092392 | GGT | 5 | 14157 | 14171 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85093319 |
| 14. | NW_001092392 | CTG | 4 | 15730 | 15741 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85093323 |
| 15. | NW_001092392 | GCT | 4 | 16220 | 16231 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85093323 |
| 16. | NW_001092392 | GAG | 4 | 19234 | 19245 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 17. | NW_001092392 | CGC | 4 | 19874 | 19885 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85093327 |
| 18. | NW_001092392 | CTT | 6 | 21530 | 21547 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 19. | NW_001092392 | CAC | 8 | 22029 | 22053 | 25 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 20. | NW_001092392 | GAT | 8 | 23178 | 23200 | 23 | 33.33% | 33.33% | 33.33% | 0.00% | 85093331 |
| 21. | NW_001092392 | GGA | 7 | 23874 | 23894 | 21 | 33.33% | 0.00% | 66.67% | 0.00% | 85093331 |
| 22. | NW_001092392 | ATG | 4 | 26532 | 26543 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 23. | NW_001092392 | GTG | 4 | 28004 | 28015 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85093337 |
| 24. | NW_001092392 | TCA | 4 | 28575 | 28586 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 25. | NW_001092392 | TCT | 4 | 29875 | 29885 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 26. | NW_001092392 | TGA | 4 | 31023 | 31034 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 27. | NW_001092392 | CGG | 4 | 33284 | 33295 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85093341 |
| 28. | NW_001092392 | TGT | 4 | 33353 | 33365 | 13 | 0.00% | 66.67% | 33.33% | 0.00% | 85093341 |
| 29. | NW_001092392 | ACT | 4 | 35471 | 35481 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 30. | NW_001092392 | TTG | 4 | 35899 | 35910 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 31. | NW_001092392 | GTG | 4 | 36261 | 36272 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 32. | NW_001092392 | CGT | 6 | 37738 | 37756 | 19 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 33. | NW_001092392 | TAC | 4 | 37794 | 37805 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 34. | NW_001092392 | TAC | 4 | 37809 | 37820 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 35. | NW_001092392 | ACT | 4 | 37819 | 37830 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 36. | NW_001092392 | TCA | 4 | 41241 | 41252 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85093345 |
| 37. | NW_001092392 | AGA | 5 | 43129 | 43143 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85093345 |
| 38. | NW_001092392 | CTG | 4 | 45363 | 45374 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 39. | NW_001092392 | GTG | 4 | 45423 | 45434 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 40. | NW_001092392 | TCA | 4 | 46781 | 46792 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 41. | NW_001092392 | ATC | 4 | 47154 | 47164 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 42. | NW_001092392 | GCA | 4 | 49552 | 49563 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85093353 |
| 43. | NW_001092392 | TGA | 5 | 49657 | 49671 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | 85093353 |
| 44. | NW_001092392 | GAT | 4 | 50031 | 50042 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85093353 |
| 45. | NW_001092392 | CCG | 4 | 51012 | 51023 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85093353 |
| 46. | NW_001092392 | TCC | 9 | 51107 | 51132 | 26 | 0.00% | 33.33% | 0.00% | 66.67% | 85093353 |
| 47. | NW_001092392 | TGG | 7 | 51396 | 51416 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | 85093353 |
| 48. | NW_001092392 | GAT | 9 | 51472 | 51498 | 27 | 33.33% | 33.33% | 33.33% | 0.00% | 85093353 |
| 49. | NW_001092392 | TGG | 4 | 51639 | 51651 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | 85093353 |
| 50. | NW_001092392 | GTG | 7 | 51678 | 51698 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | 85093353 |
| 51. | NW_001092392 | GTT | 7 | 51731 | 51751 | 21 | 0.00% | 66.67% | 33.33% | 0.00% | 85093353 |
| 52. | NW_001092392 | TCC | 5 | 51905 | 51919 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85093353 |
| 53. | NW_001092392 | TCA | 4 | 52032 | 52043 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85093353 |
| 54. | NW_001092392 | TCC | 4 | 52074 | 52085 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85093353 |
| 55. | NW_001092392 | TCA | 4 | 52083 | 52094 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85093353 |
| 56. | NW_001092392 | TCT | 5 | 52145 | 52160 | 16 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 57. | NW_001092392 | CAT | 4 | 56232 | 56244 | 13 | 33.33% | 33.33% | 0.00% | 33.33% | 85093357 |
| 58. | NW_001092392 | CGT | 4 | 56565 | 56575 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85093357 |
| 59. | NW_001092392 | CCT | 4 | 57962 | 57973 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 60. | NW_001092392 | TCA | 4 | 58324 | 58334 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 61. | NW_001092392 | ACC | 4 | 60627 | 60637 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85093361 |
| 62. | NW_001092392 | GGC | 4 | 60952 | 60963 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85093361 |
| 63. | NW_001092392 | TCA | 8 | 61082 | 61105 | 24 | 33.33% | 33.33% | 0.00% | 33.33% | 85093361 |
| 64. | NW_001092392 | ACC | 5 | 61395 | 61409 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85093361 |