List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092392 | TTAT | 3 | 1672 | 1683 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092392 | TCTT | 3 | 3156 | 3167 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 3. | NW_001092392 | CCTA | 3 | 3529 | 3540 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 4. | NW_001092392 | TAAT | 3 | 4116 | 4127 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 5. | NW_001092392 | ATTA | 5 | 4180 | 4200 | 21 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092392 | TTAA | 3 | 4290 | 4301 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 7. | NW_001092392 | TTAA | 3 | 4320 | 4332 | 13 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001092392 | GGGA | 3 | 9600 | 9611 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 9. | NW_001092392 | GATT | 3 | 9691 | 9701 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 10. | NW_001092392 | TAAT | 4 | 11555 | 11570 | 16 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 11. | NW_001092392 | TAAA | 3 | 11931 | 11941 | 11 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001092392 | GTAT | 3 | 13087 | 13097 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 13. | NW_001092392 | GCAA | 3 | 17817 | 17827 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 14. | NW_001092392 | GGTA | 4 | 19122 | 19137 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 15. | NW_001092392 | CTTT | 5 | 19648 | 19667 | 20 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 16. | NW_001092392 | CTGG | 3 | 22246 | 22257 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 17. | NW_001092392 | GGTT | 3 | 22702 | 22713 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 18. | NW_001092392 | CTAC | 3 | 22996 | 23007 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 19. | NW_001092392 | CTAC | 3 | 23038 | 23049 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 20. | NW_001092392 | GTCA | 4 | 23055 | 23070 | 16 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 21. | NW_001092392 | CTAC | 3 | 23131 | 23142 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 22. | NW_001092392 | TACC | 8 | 23275 | 23307 | 33 | 25.00% | 25.00% | 0.00% | 50.00% | 85093331 |
| 23. | NW_001092392 | ATCC | 3 | 23382 | 23392 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85093331 |
| 24. | NW_001092392 | CCTA | 4 | 26065 | 26080 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 25. | NW_001092392 | GATG | 3 | 30231 | 30242 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 26. | NW_001092392 | GGTA | 3 | 30263 | 30274 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 27. | NW_001092392 | GTCA | 8 | 30344 | 30374 | 31 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 28. | NW_001092392 | GTCA | 3 | 32174 | 32186 | 13 | 25.00% | 25.00% | 25.00% | 25.00% | 85093341 |
| 29. | NW_001092392 | AAAT | 3 | 33616 | 33626 | 11 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 30. | NW_001092392 | CCTG | 3 | 42157 | 42167 | 11 | 0.00% | 25.00% | 25.00% | 50.00% | 85093345 |
| 31. | NW_001092392 | GGCC | 3 | 44939 | 44949 | 11 | 0.00% | 0.00% | 50.00% | 50.00% | 85093345 |
| 32. | NW_001092392 | GGAA | 3 | 45867 | 45878 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 33. | NW_001092392 | TACC | 3 | 46104 | 46115 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 34. | NW_001092392 | TGGT | 3 | 47501 | 47511 | 11 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 35. | NW_001092392 | CCGG | 3 | 47526 | 47537 | 12 | 0.00% | 0.00% | 50.00% | 50.00% | Non-Coding |
| 36. | NW_001092392 | TACA | 6 | 47833 | 47854 | 22 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 37. | NW_001092392 | GGGT | 3 | 48758 | 48768 | 11 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 38. | NW_001092392 | GAAG | 3 | 50546 | 50558 | 13 | 50.00% | 0.00% | 50.00% | 0.00% | 85093353 |
| 39. | NW_001092392 | AGAA | 3 | 52247 | 52259 | 13 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 40. | NW_001092392 | TGGG | 3 | 52337 | 52347 | 11 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 41. | NW_001092392 | GTTC | 3 | 58185 | 58195 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 42. | NW_001092392 | GTGA | 3 | 61585 | 61595 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |