List of
Perfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092341 | GTG | 7 | 956 | 976 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 2. | NW_001092341 | CAA | 5 | 6371 | 6385 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85091715 |
| 3. | NW_001092341 | TCC | 4 | 10098 | 10109 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85091717 |
| 4. | NW_001092341 | GTT | 8 | 10283 | 10306 | 24 | 0.00% | 66.67% | 33.33% | 0.00% | 85091717 |
| 5. | NW_001092341 | AGA | 9 | 10343 | 10369 | 27 | 66.67% | 0.00% | 33.33% | 0.00% | 85091717 |
| 6. | NW_001092341 | TGG | 4 | 10723 | 10734 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85091717 |
| 7. | NW_001092341 | TGT | 6 | 10883 | 10900 | 18 | 0.00% | 66.67% | 33.33% | 0.00% | 85091717 |
| 8. | NW_001092341 | TGT | 4 | 12627 | 12638 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85091717 |
| 9. | NW_001092341 | TTC | 4 | 16445 | 16456 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85091719 |
| 10. | NW_001092341 | TCA | 5 | 24282 | 24296 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 11. | NW_001092341 | CTG | 4 | 24692 | 24703 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85091725 |
| 12. | NW_001092341 | CCT | 4 | 26141 | 26152 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85091727 |
| 13. | NW_001092341 | AGA | 7 | 34015 | 34035 | 21 | 66.67% | 0.00% | 33.33% | 0.00% | 85091731 |
| 14. | NW_001092341 | AGG | 5 | 34042 | 34056 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85091731 |
| 15. | NW_001092341 | TGC | 6 | 34149 | 34166 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 85091731 |
| 16. | NW_001092341 | ACC | 6 | 34705 | 34722 | 18 | 33.33% | 0.00% | 0.00% | 66.67% | 85091731 |
| 17. | NW_001092341 | CAG | 4 | 34875 | 34886 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85091731 |
| 18. | NW_001092341 | GGT | 7 | 35146 | 35166 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | 85091731 |
| 19. | NW_001092341 | CTC | 5 | 41871 | 41885 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85091733 |
| 20. | NW_001092341 | CAT | 4 | 44922 | 44933 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 21. | NW_001092341 | GTG | 4 | 45321 | 45332 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 22. | NW_001092341 | TGG | 4 | 45334 | 45345 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 23. | NW_001092341 | TTG | 4 | 45376 | 45387 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 24. | NW_001092341 | TTG | 14 | 45501 | 45542 | 42 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 25. | NW_001092341 | TGT | 27 | 45544 | 45624 | 81 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 26. | NW_001092341 | TTG | 18 | 45627 | 45680 | 54 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 27. | NW_001092341 | GTT | 5 | 45683 | 45697 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 28. | NW_001092341 | GTT | 10 | 45708 | 45737 | 30 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 29. | NW_001092341 | TGT | 29 | 45740 | 45826 | 87 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 30. | NW_001092341 | TCA | 4 | 54200 | 54211 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85091737 |
| 31. | NW_001092341 | GAG | 6 | 56598 | 56615 | 18 | 33.33% | 0.00% | 66.67% | 0.00% | 85091737 |
| 32. | NW_001092341 | CAC | 6 | 59155 | 59172 | 18 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 33. | NW_001092341 | AGG | 4 | 66085 | 66096 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85091743 |
| 34. | NW_001092341 | ACG | 4 | 70177 | 70188 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85091747 |
| 35. | NW_001092341 | GCA | 4 | 72050 | 72061 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 36. | NW_001092341 | ACG | 10 | 72379 | 72408 | 30 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 37. | NW_001092341 | GAA | 5 | 73457 | 73471 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 38. | NW_001092341 | GAA | 5 | 73475 | 73489 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 39. | NW_001092341 | ACA | 6 | 75030 | 75047 | 18 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 40. | NW_001092341 | GTC | 4 | 75188 | 75199 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 41. | NW_001092341 | TCA | 5 | 75367 | 75381 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 42. | NW_001092341 | GAG | 8 | 77686 | 77709 | 24 | 33.33% | 0.00% | 66.67% | 0.00% | 85091749 |
| 43. | NW_001092341 | GTC | 4 | 80388 | 80399 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85091751 |
| 44. | NW_001092341 | GCT | 4 | 83398 | 83409 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85091753 |
| 45. | NW_001092341 | GGT | 4 | 84891 | 84902 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 46. | NW_001092341 | TGC | 4 | 89809 | 89820 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85091757 |
| 47. | NW_001092341 | TCC | 8 | 89925 | 89948 | 24 | 0.00% | 33.33% | 0.00% | 66.67% | 85091757 |
| 48. | NW_001092341 | TGG | 5 | 90581 | 90595 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85091757 |
| 49. | NW_001092341 | GAT | 5 | 90838 | 90852 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | 85091757 |
| 50. | NW_001092341 | CAT | 5 | 101576 | 101590 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 51. | NW_001092341 | TCT | 6 | 101678 | 101695 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 52. | NW_001092341 | GAA | 6 | 105984 | 106001 | 18 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 53. | NW_001092341 | ATG | 4 | 108296 | 108307 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85091767 |
| 54. | NW_001092341 | TGT | 4 | 108500 | 108511 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |