List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092341 | CAAG | 3 | 19 | 29 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 2. | NW_001092341 | AGGT | 3 | 148 | 159 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 3. | NW_001092341 | TTGA | 3 | 788 | 799 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 4. | NW_001092341 | TGCA | 3 | 2049 | 2059 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 5. | NW_001092341 | CCCG | 3 | 6188 | 6199 | 12 | 0.00% | 0.00% | 25.00% | 75.00% | 85091715 |
| 6. | NW_001092341 | TCCA | 3 | 7694 | 7705 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85091715 |
| 7. | NW_001092341 | CGTC | 3 | 8968 | 8979 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 8. | NW_001092341 | CTGT | 3 | 9703 | 9713 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 9. | NW_001092341 | TGTT | 3 | 12800 | 12811 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | 85091717 |
| 10. | NW_001092341 | AAAG | 3 | 12826 | 12836 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | 85091717 |
| 11. | NW_001092341 | CTGT | 3 | 15266 | 15276 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 12. | NW_001092341 | CATC | 4 | 16494 | 16509 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | 85091719 |
| 13. | NW_001092341 | TACG | 3 | 16823 | 16834 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 85091719 |
| 14. | NW_001092341 | CATC | 3 | 17941 | 17951 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 15. | NW_001092341 | CCCA | 3 | 24897 | 24907 | 11 | 25.00% | 0.00% | 0.00% | 75.00% | 85091725 |
| 16. | NW_001092341 | AAGG | 3 | 25145 | 25156 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | 85091725 |
| 17. | NW_001092341 | TTGC | 3 | 25494 | 25505 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 18. | NW_001092341 | CGAA | 3 | 26886 | 26896 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | 85091727 |
| 19. | NW_001092341 | AGTG | 3 | 28467 | 28477 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 20. | NW_001092341 | TTCC | 3 | 29413 | 29423 | 11 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 21. | NW_001092341 | GATA | 3 | 38996 | 39007 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 22. | NW_001092341 | TGTC | 3 | 40317 | 40327 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 23. | NW_001092341 | CATC | 3 | 41112 | 41123 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85091733 |
| 24. | NW_001092341 | TTGA | 3 | 41759 | 41771 | 13 | 25.00% | 50.00% | 25.00% | 0.00% | 85091733 |
| 25. | NW_001092341 | TTTA | 3 | 44452 | 44463 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 26. | NW_001092341 | TCCG | 3 | 44504 | 44515 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 27. | NW_001092341 | GAAA | 4 | 45190 | 45204 | 15 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 28. | NW_001092341 | GGTC | 3 | 45438 | 45449 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 29. | NW_001092341 | CCAT | 3 | 51749 | 51760 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 30. | NW_001092341 | GGGA | 3 | 51867 | 51878 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 31. | NW_001092341 | CCGT | 3 | 53632 | 53643 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 32. | NW_001092341 | CCCG | 3 | 58010 | 58021 | 12 | 0.00% | 0.00% | 25.00% | 75.00% | Non-Coding |
| 33. | NW_001092341 | CGAT | 3 | 58278 | 58289 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 34. | NW_001092341 | ACCT | 3 | 58975 | 58987 | 13 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 35. | NW_001092341 | TACC | 6 | 60704 | 60731 | 28 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 36. | NW_001092341 | TCAC | 3 | 60767 | 60779 | 13 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 37. | NW_001092341 | CCTC | 3 | 65725 | 65736 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | 85091743 |
| 38. | NW_001092341 | CACT | 3 | 65757 | 65768 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85091743 |
| 39. | NW_001092341 | CCCG | 3 | 68460 | 68471 | 12 | 0.00% | 0.00% | 25.00% | 75.00% | 85091745 |
| 40. | NW_001092341 | ATAC | 4 | 69853 | 69868 | 16 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 41. | NW_001092341 | GACG | 3 | 69950 | 69961 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | 85091747 |
| 42. | NW_001092341 | ATAC | 3 | 70755 | 70766 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | 85091747 |
| 43. | NW_001092341 | ACTA | 3 | 73150 | 73161 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 44. | NW_001092341 | TCCA | 4 | 74060 | 74075 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 45. | NW_001092341 | TTCA | 3 | 74588 | 74603 | 16 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 46. | NW_001092341 | TGCT | 5 | 75336 | 75355 | 20 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 47. | NW_001092341 | GACG | 3 | 75688 | 75699 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 48. | NW_001092341 | TTTG | 3 | 77775 | 77786 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 49. | NW_001092341 | TTTC | 3 | 77905 | 77915 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 50. | NW_001092341 | AGCC | 7 | 79662 | 79689 | 28 | 25.00% | 0.00% | 25.00% | 50.00% | 85091751 |
| 51. | NW_001092341 | CAAA | 3 | 79857 | 79867 | 11 | 75.00% | 0.00% | 0.00% | 25.00% | 85091751 |
| 52. | NW_001092341 | TTGC | 3 | 83019 | 83029 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | 85091753 |
| 53. | NW_001092341 | TTGG | 3 | 83716 | 83726 | 11 | 0.00% | 50.00% | 50.00% | 0.00% | 85091753 |
| 54. | NW_001092341 | GTGG | 3 | 84866 | 84877 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 55. | NW_001092341 | TCTG | 3 | 85069 | 85080 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 56. | NW_001092341 | GACT | 3 | 85209 | 85220 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 57. | NW_001092341 | CACC | 8 | 85629 | 85660 | 32 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 58. | NW_001092341 | CACG | 11 | 85803 | 85846 | 44 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 59. | NW_001092341 | ACCC | 3 | 86240 | 86251 | 12 | 25.00% | 0.00% | 0.00% | 75.00% | 85091755 |
| 60. | NW_001092341 | TGTA | 3 | 89462 | 89473 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 61. | NW_001092341 | GGTA | 3 | 91029 | 91040 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 62. | NW_001092341 | TAGG | 3 | 91214 | 91225 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 63. | NW_001092341 | TATG | 6 | 91235 | 91262 | 28 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 64. | NW_001092341 | TACA | 4 | 91950 | 91965 | 16 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 65. | NW_001092341 | ACGG | 3 | 92888 | 92898 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 66. | NW_001092341 | CGAC | 4 | 96940 | 96955 | 16 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 67. | NW_001092341 | TGTA | 3 | 98442 | 98454 | 13 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 68. | NW_001092341 | GCAA | 3 | 101798 | 101809 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 69. | NW_001092341 | CTTT | 3 | 103016 | 103027 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 70. | NW_001092341 | CCAT | 6 | 106360 | 106383 | 24 | 25.00% | 25.00% | 0.00% | 50.00% | 85091765 |
| 71. | NW_001092341 | TCCC | 3 | 106539 | 106549 | 11 | 0.00% | 25.00% | 0.00% | 75.00% | 85091765 |
| 72. | NW_001092341 | TTTG | 3 | 108418 | 108429 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 73. | NW_001092341 | GATT | 3 | 110455 | 110466 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |