List of
Imperfect Hexa
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092341 | ACAGAC | 3 | 7539 | 7556 | 18 | 50.00% | 0.00% | 16.67% | 33.33% | 85091715 |
| 2. | NW_001092341 | CTTTTC | 3 | 9449 | 9466 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 3. | NW_001092341 | TGCCGT | 3 | 10177 | 10194 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 85091717 |
| 4. | NW_001092341 | TGGGAA | 5 | 10512 | 10541 | 30 | 33.33% | 16.67% | 50.00% | 0.00% | 85091717 |
| 5. | NW_001092341 | TAGTGG | 3 | 12706 | 12723 | 18 | 16.67% | 33.33% | 50.00% | 0.00% | 85091717 |
| 6. | NW_001092341 | AGAAAC | 3 | 12879 | 12896 | 18 | 66.67% | 0.00% | 16.67% | 16.67% | 85091717 |
| 7. | NW_001092341 | CATGTC | 4 | 13182 | 13205 | 24 | 16.67% | 33.33% | 16.67% | 33.33% | Non-Coding |
| 8. | NW_001092341 | TCCTGC | 3 | 24545 | 24562 | 18 | 0.00% | 33.33% | 16.67% | 50.00% | 85091725 |
| 9. | NW_001092341 | TTGAGG | 3 | 25625 | 25642 | 18 | 16.67% | 33.33% | 50.00% | 0.00% | Non-Coding |
| 10. | NW_001092341 | CGTAGC | 3 | 32782 | 32799 | 18 | 16.67% | 16.67% | 33.33% | 33.33% | 85091729 |
| 11. | NW_001092341 | TGGGAG | 3 | 33145 | 33162 | 18 | 16.67% | 16.67% | 66.67% | 0.00% | 85091729 |
| 12. | NW_001092341 | TAGACC | 4 | 33668 | 33691 | 24 | 33.33% | 16.67% | 16.67% | 33.33% | 85091731 |
| 13. | NW_001092341 | GCCCAC | 3 | 33696 | 33713 | 18 | 16.67% | 0.00% | 16.67% | 66.67% | 85091731 |
| 14. | NW_001092341 | CACCAG | 22 | 33858 | 33989 | 132 | 33.33% | 0.00% | 16.67% | 50.00% | 85091731 |
| 15. | NW_001092341 | CGCTAC | 3 | 34128 | 34145 | 18 | 16.67% | 16.67% | 16.67% | 50.00% | 85091731 |
| 16. | NW_001092341 | TTGGAG | 4 | 34223 | 34246 | 24 | 16.67% | 33.33% | 50.00% | 0.00% | 85091731 |
| 17. | NW_001092341 | CTTGGG | 4 | 34305 | 34328 | 24 | 0.00% | 33.33% | 50.00% | 16.67% | 85091731 |
| 18. | NW_001092341 | AGTGGG | 4 | 34344 | 34367 | 24 | 16.67% | 16.67% | 66.67% | 0.00% | 85091731 |
| 19. | NW_001092341 | GTGGGA | 4 | 34375 | 34398 | 24 | 16.67% | 16.67% | 66.67% | 0.00% | 85091731 |
| 20. | NW_001092341 | GCTGGA | 3 | 43629 | 43646 | 18 | 16.67% | 16.67% | 50.00% | 16.67% | Non-Coding |
| 21. | NW_001092341 | CAACAC | 3 | 57850 | 57867 | 18 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 22. | NW_001092341 | TTTTGG | 3 | 60847 | 60865 | 19 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 23. | NW_001092341 | CATCAC | 6 | 61697 | 61732 | 36 | 33.33% | 16.67% | 0.00% | 50.00% | 85091741 |
| 24. | NW_001092341 | GTTGAG | 4 | 62047 | 62070 | 24 | 16.67% | 33.33% | 50.00% | 0.00% | 85091741 |
| 25. | NW_001092341 | GTGCCG | 3 | 62107 | 62124 | 18 | 0.00% | 16.67% | 50.00% | 33.33% | 85091741 |
| 26. | NW_001092341 | CTGTTC | 3 | 62810 | 62827 | 18 | 0.00% | 50.00% | 16.67% | 33.33% | 85091741 |
| 27. | NW_001092341 | GCTAGT | 4 | 65978 | 66001 | 24 | 16.67% | 33.33% | 33.33% | 16.67% | 85091743 |
| 28. | NW_001092341 | AAGAGA | 3 | 75264 | 75281 | 18 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 29. | NW_001092341 | CTTCAG | 3 | 83507 | 83524 | 18 | 16.67% | 33.33% | 16.67% | 33.33% | 85091753 |
| 30. | NW_001092341 | GCTTCG | 4 | 83605 | 83628 | 24 | 0.00% | 33.33% | 33.33% | 33.33% | 85091753 |
| 31. | NW_001092341 | CATTTC | 5 | 90110 | 90139 | 30 | 16.67% | 50.00% | 0.00% | 33.33% | 85091757 |
| 32. | NW_001092341 | GGGATG | 3 | 90516 | 90538 | 23 | 16.67% | 16.67% | 66.67% | 0.00% | 85091757 |
| 33. | NW_001092341 | GAAAGG | 3 | 90698 | 90715 | 18 | 50.00% | 0.00% | 50.00% | 0.00% | 85091757 |
| 34. | NW_001092341 | CTTCCA | 3 | 99854 | 99870 | 17 | 16.67% | 33.33% | 0.00% | 50.00% | Non-Coding |
| 35. | NW_001092341 | CAATCG | 3 | 100268 | 100285 | 18 | 33.33% | 16.67% | 16.67% | 33.33% | 85091761 |
| 36. | NW_001092341 | AAGAAA | 3 | 101932 | 101950 | 19 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 37. | NW_001092341 | AGAAAA | 3 | 101960 | 101977 | 18 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 38. | NW_001092341 | GGTGCT | 4 | 106834 | 106857 | 24 | 0.00% | 33.33% | 50.00% | 16.67% | Non-Coding |