List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092339 | AATA | 3 | 251 | 263 | 13 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092339 | GGAA | 3 | 352 | 362 | 11 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 3. | NW_001092339 | AATT | 3 | 2237 | 2247 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092339 | TAAG | 3 | 2832 | 2843 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 5. | NW_001092339 | TTAA | 3 | 3891 | 3903 | 13 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092339 | TACT | 3 | 4387 | 4398 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | 85091629 |
| 7. | NW_001092339 | AATA | 3 | 5173 | 5184 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001092339 | AATT | 4 | 5212 | 5227 | 16 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 9. | NW_001092339 | AATT | 3 | 5758 | 5768 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 10. | NW_001092339 | TAGT | 3 | 5813 | 5823 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 11. | NW_001092339 | TTAT | 3 | 8494 | 8506 | 13 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001092339 | TCTT | 3 | 10209 | 10220 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 13. | NW_001092339 | AATT | 3 | 11015 | 11027 | 13 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 14. | NW_001092339 | AAAT | 3 | 11804 | 11815 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 15. | NW_001092339 | ATAA | 4 | 13743 | 13757 | 15 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 16. | NW_001092339 | TTTA | 3 | 15575 | 15587 | 13 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 17. | NW_001092339 | TAAT | 3 | 15876 | 15886 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 18. | NW_001092339 | TTTA | 3 | 15891 | 15902 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 19. | NW_001092339 | TAAT | 3 | 16157 | 16168 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 20. | NW_001092339 | AAAG | 3 | 16184 | 16194 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 21. | NW_001092339 | ATTT | 3 | 16697 | 16708 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 22. | NW_001092339 | TCTT | 3 | 17241 | 17252 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 23. | NW_001092339 | ATTT | 3 | 17596 | 17606 | 11 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 24. | NW_001092339 | TTTA | 3 | 19152 | 19163 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 25. | NW_001092339 | CTTT | 3 | 20677 | 20688 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 26. | NW_001092339 | ATTT | 3 | 24512 | 24524 | 13 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 27. | NW_001092339 | TAGT | 3 | 26329 | 26340 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 28. | NW_001092339 | TATT | 3 | 26465 | 26475 | 11 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 29. | NW_001092339 | TAAG | 3 | 27462 | 27473 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | 85091631 |
| 30. | NW_001092339 | TACC | 3 | 27687 | 27697 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85091631 |
| 31. | NW_001092339 | TAAT | 3 | 28079 | 28090 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | 85091631 |
| 32. | NW_001092339 | TAAA | 3 | 28958 | 28968 | 11 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 33. | NW_001092339 | ATTA | 5 | 29415 | 29434 | 20 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 34. | NW_001092339 | AAAT | 3 | 33024 | 33035 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 35. | NW_001092339 | ACTA | 4 | 36455 | 36469 | 15 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 36. | NW_001092339 | AAAT | 3 | 36496 | 36507 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 37. | NW_001092339 | TAAT | 3 | 37297 | 37311 | 15 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 38. | NW_001092339 | ACTT | 3 | 40245 | 40255 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 39. | NW_001092339 | TTAA | 3 | 44733 | 44743 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 40. | NW_001092339 | TTTA | 3 | 48685 | 48696 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 41. | NW_001092339 | AGTA | 3 | 48701 | 48712 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 42. | NW_001092339 | TTTC | 3 | 50280 | 50291 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 43. | NW_001092339 | TTAT | 3 | 53162 | 53173 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 44. | NW_001092339 | ACTG | 3 | 54516 | 54527 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 45. | NW_001092339 | AAAT | 3 | 54579 | 54589 | 11 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 46. | NW_001092339 | TTGG | 3 | 54759 | 54770 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 47. | NW_001092339 | AATT | 3 | 54977 | 54988 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 48. | NW_001092339 | AGGT | 3 | 56703 | 56714 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 49. | NW_001092339 | AATA | 3 | 57023 | 57034 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 50. | NW_001092339 | TAAT | 3 | 60527 | 60538 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 51. | NW_001092339 | TAAT | 3 | 61394 | 61404 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 52. | NW_001092339 | TTTA | 4 | 61513 | 61528 | 16 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 53. | NW_001092339 | TTAA | 3 | 61873 | 61883 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 54. | NW_001092339 | GTAC | 3 | 62316 | 62326 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 55. | NW_001092339 | TAAA | 3 | 62751 | 62762 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 56. | NW_001092339 | TAAA | 3 | 66297 | 66309 | 13 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 57. | NW_001092339 | TTTA | 3 | 68985 | 68996 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 58. | NW_001092339 | GCAA | 3 | 69243 | 69254 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 59. | NW_001092339 | AATA | 3 | 71120 | 71132 | 13 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 60. | NW_001092339 | TTAA | 3 | 71881 | 71891 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 61. | NW_001092339 | AATT | 3 | 71997 | 72009 | 13 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 62. | NW_001092339 | GAAA | 3 | 72426 | 72436 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 63. | NW_001092339 | AATA | 3 | 72457 | 72469 | 13 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 64. | NW_001092339 | TCGC | 3 | 76906 | 76917 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 65. | NW_001092339 | TTAA | 4 | 78686 | 78701 | 16 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 66. | NW_001092339 | CTTA | 4 | 81403 | 81418 | 16 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 67. | NW_001092339 | TTAA | 3 | 83022 | 83033 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 68. | NW_001092339 | TAAT | 3 | 86509 | 86520 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 69. | NW_001092339 | TAGA | 3 | 88069 | 88080 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 70. | NW_001092339 | ATTC | 3 | 89420 | 89430 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 71. | NW_001092339 | ATTA | 6 | 91772 | 91796 | 25 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 72. | NW_001092339 | CTAA | 3 | 94930 | 94941 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 73. | NW_001092339 | TTCC | 3 | 96550 | 96560 | 11 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 74. | NW_001092339 | CGCA | 3 | 98798 | 98808 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 75. | NW_001092339 | TAAC | 3 | 100991 | 101003 | 13 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 76. | NW_001092339 | GTCT | 3 | 103269 | 103280 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 77. | NW_001092339 | TCCT | 3 | 103921 | 103932 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 78. | NW_001092339 | GGTT | 4 | 104416 | 104431 | 16 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |