List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092337 | TACC | 3 | 8340 | 8351 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 2. | NW_001092337 | GTTT | 4 | 8606 | 8621 | 16 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 3. | NW_001092337 | CTCC | 3 | 10547 | 10558 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 4. | NW_001092337 | TTGC | 3 | 12589 | 12599 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | 85091517 |
| 5. | NW_001092337 | CAGC | 3 | 13368 | 13379 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 85091517 |
| 6. | NW_001092337 | TTTC | 3 | 18498 | 18508 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 7. | NW_001092337 | AACC | 3 | 18545 | 18555 | 11 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 8. | NW_001092337 | GCAA | 3 | 20637 | 20647 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 9. | NW_001092337 | TTTC | 5 | 20691 | 20709 | 19 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 10. | NW_001092337 | GCAA | 4 | 23350 | 23365 | 16 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 11. | NW_001092337 | TTGA | 3 | 27992 | 28003 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 12. | NW_001092337 | ATCC | 3 | 30115 | 30127 | 13 | 25.00% | 25.00% | 0.00% | 50.00% | 85091531 |
| 13. | NW_001092337 | AGGG | 3 | 30579 | 30589 | 11 | 25.00% | 0.00% | 75.00% | 0.00% | 85091531 |
| 14. | NW_001092337 | TATC | 3 | 35727 | 35737 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | 85091535 |
| 15. | NW_001092337 | GTTA | 3 | 36727 | 36738 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 16. | NW_001092337 | CATT | 3 | 41348 | 41360 | 13 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 17. | NW_001092337 | GGTT | 3 | 42658 | 42669 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | 85091539 |
| 18. | NW_001092337 | CTGG | 3 | 50440 | 50452 | 13 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 19. | NW_001092337 | CGAA | 3 | 50660 | 50670 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 20. | NW_001092337 | ATCG | 3 | 50876 | 50886 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 21. | NW_001092337 | TACC | 3 | 51237 | 51248 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 22. | NW_001092337 | TACA | 3 | 51439 | 51450 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 23. | NW_001092337 | GGAA | 3 | 53749 | 53759 | 11 | 50.00% | 0.00% | 50.00% | 0.00% | 85091547 |
| 24. | NW_001092337 | CCAA | 3 | 59072 | 59084 | 13 | 50.00% | 0.00% | 0.00% | 50.00% | 85091553 |
| 25. | NW_001092337 | CAAA | 3 | 59234 | 59245 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | 85091553 |
| 26. | NW_001092337 | GGGA | 3 | 63284 | 63295 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 85091557 |
| 27. | NW_001092337 | TTGA | 3 | 72106 | 72117 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 28. | NW_001092337 | TCAA | 3 | 76379 | 76390 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 29. | NW_001092337 | TCGC | 3 | 79740 | 79752 | 13 | 0.00% | 25.00% | 25.00% | 50.00% | 85091567 |
| 30. | NW_001092337 | CGTC | 3 | 83073 | 83084 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 31. | NW_001092337 | TTAT | 3 | 83830 | 83841 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 32. | NW_001092337 | TTAA | 3 | 84811 | 84822 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 33. | NW_001092337 | AATT | 3 | 87893 | 87904 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 34. | NW_001092337 | ATTA | 3 | 87944 | 87955 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 35. | NW_001092337 | AATA | 3 | 88450 | 88461 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |