List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092321 | TGC | 4 | 726 | 737 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85090873 |
| 2. | NW_001092321 | GGA | 5 | 945 | 959 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85090873 |
| 3. | NW_001092321 | AGA | 14 | 945 | 986 | 42 | 66.67% | 0.00% | 33.33% | 0.00% | 85090873 |
| 4. | NW_001092321 | CTT | 4 | 1391 | 1403 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 5. | NW_001092321 | TCT | 4 | 4481 | 4495 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 6. | NW_001092321 | GTT | 5 | 4903 | 4917 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85090875 |
| 7. | NW_001092321 | GAT | 4 | 5737 | 5748 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85090875 |
| 8. | NW_001092321 | AGC | 4 | 6849 | 6860 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 9. | NW_001092321 | TAT | 5 | 9582 | 9596 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 10. | NW_001092321 | ATA | 4 | 10552 | 10564 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 11. | NW_001092321 | TAC | 4 | 10649 | 10659 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 12. | NW_001092321 | TAA | 4 | 11046 | 11057 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 13. | NW_001092321 | ATA | 4 | 11332 | 11342 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 14. | NW_001092321 | CTG | 4 | 19869 | 19880 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 15. | NW_001092321 | CGT | 5 | 21563 | 21577 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 16. | NW_001092321 | GGA | 5 | 30345 | 30362 | 18 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 17. | NW_001092321 | GGA | 4 | 33388 | 33398 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85090883 |
| 18. | NW_001092321 | GAA | 4 | 34507 | 34518 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85090883 |
| 19. | NW_001092321 | ACT | 4 | 34676 | 34687 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85090883 |
| 20. | NW_001092321 | AGA | 4 | 35584 | 35594 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 21. | NW_001092321 | CTT | 24 | 36031 | 36102 | 72 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 22. | NW_001092321 | CAT | 4 | 37650 | 37661 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 23. | NW_001092321 | TCT | 4 | 37819 | 37830 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85090885 |
| 24. | NW_001092321 | CTC | 5 | 37844 | 37858 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85090885 |
| 25. | NW_001092321 | GTG | 11 | 40005 | 40037 | 33 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 26. | NW_001092321 | TCA | 4 | 40313 | 40324 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 27. | NW_001092321 | GCC | 5 | 45212 | 45226 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 85090891 |
| 28. | NW_001092321 | GGA | 4 | 45479 | 45490 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85090891 |
| 29. | NW_001092321 | GTG | 4 | 45646 | 45657 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85090891 |
| 30. | NW_001092321 | GGA | 4 | 47705 | 47716 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85090893 |
| 31. | NW_001092321 | AAG | 4 | 51107 | 51118 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85090895 |
| 32. | NW_001092321 | AGA | 4 | 51873 | 51885 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | 85090895 |
| 33. | NW_001092321 | GCA | 4 | 55590 | 55601 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85090897 |
| 34. | NW_001092321 | GAG | 5 | 57956 | 57970 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85090897 |
| 35. | NW_001092321 | CGC | 10 | 59525 | 59554 | 30 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 36. | NW_001092321 | GAC | 4 | 59758 | 59769 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85090899 |
| 37. | NW_001092321 | CTC | 5 | 60121 | 60135 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85090899 |
| 38. | NW_001092321 | GAG | 4 | 60615 | 60626 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85090899 |
| 39. | NW_001092321 | GAG | 4 | 60652 | 60663 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85090899 |
| 40. | NW_001092321 | GAG | 7 | 60688 | 60708 | 21 | 33.33% | 0.00% | 66.67% | 0.00% | 85090899 |
| 41. | NW_001092321 | GCC | 4 | 62550 | 62562 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 42. | NW_001092321 | AAC | 8 | 62644 | 62667 | 24 | 66.67% | 0.00% | 0.00% | 33.33% | 85090901 |
| 43. | NW_001092321 | AAC | 7 | 62683 | 62703 | 21 | 66.67% | 0.00% | 0.00% | 33.33% | 85090901 |
| 44. | NW_001092321 | CGC | 4 | 63030 | 63040 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 85090901 |
| 45. | NW_001092321 | CAC | 4 | 63350 | 63360 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85090901 |
| 46. | NW_001092321 | CAG | 12 | 63923 | 63958 | 36 | 33.33% | 0.00% | 33.33% | 33.33% | 85090901 |
| 47. | NW_001092321 | CAG | 4 | 64255 | 64269 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85090901 |
| 48. | NW_001092321 | GAA | 4 | 64335 | 64346 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85090901 |
| 49. | NW_001092321 | CAA | 7 | 65300 | 65320 | 21 | 66.67% | 0.00% | 0.00% | 33.33% | 85090901 |
| 50. | NW_001092321 | AGT | 4 | 66437 | 66448 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 51. | NW_001092321 | GAA | 4 | 67353 | 67364 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |