List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092316 | AGG | 4 | 71 | 82 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 2. | NW_001092316 | GGA | 8 | 332 | 355 | 24 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 3. | NW_001092316 | CTC | 12 | 1783 | 1818 | 36 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 4. | NW_001092316 | TGC | 4 | 4019 | 4030 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 5. | NW_001092316 | ACC | 4 | 4521 | 4532 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 6. | NW_001092316 | CAC | 9 | 4823 | 4849 | 27 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 7. | NW_001092316 | GCC | 5 | 8416 | 8430 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 85090720 |
| 8. | NW_001092316 | CGG | 5 | 8532 | 8546 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85090720 |
| 9. | NW_001092316 | ATC | 6 | 9617 | 9634 | 18 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 10. | NW_001092316 | TAT | 5 | 9763 | 9776 | 14 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 11. | NW_001092316 | GAT | 4 | 9931 | 9945 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 12. | NW_001092316 | CAG | 4 | 10875 | 10886 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85090722 |
| 13. | NW_001092316 | AAG | 4 | 11215 | 11227 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | 85090722 |
| 14. | NW_001092316 | GGT | 5 | 11419 | 11433 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85090722 |
| 15. | NW_001092316 | GTT | 8 | 11606 | 11629 | 24 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 16. | NW_001092316 | GAA | 4 | 12239 | 12250 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 17. | NW_001092316 | ACC | 9 | 12767 | 12793 | 27 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 18. | NW_001092316 | ACG | 8 | 12992 | 13016 | 25 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 19. | NW_001092316 | CGA | 4 | 13050 | 13061 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 20. | NW_001092316 | CTC | 4 | 14179 | 14190 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85090724 |
| 21. | NW_001092316 | AGA | 4 | 15196 | 15206 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 22. | NW_001092316 | GGT | 4 | 15897 | 15908 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 23. | NW_001092316 | TAC | 9 | 17945 | 17971 | 27 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 24. | NW_001092316 | AGA | 4 | 18981 | 18992 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85090726 |
| 25. | NW_001092316 | GTG | 4 | 19316 | 19329 | 14 | 0.00% | 33.33% | 66.67% | 0.00% | 85090726 |
| 26. | NW_001092316 | GTC | 5 | 19359 | 19372 | 14 | 0.00% | 33.33% | 33.33% | 33.33% | 85090726 |
| 27. | NW_001092316 | ACG | 8 | 19559 | 19582 | 24 | 33.33% | 0.00% | 33.33% | 33.33% | 85090726 |
| 28. | NW_001092316 | GTC | 4 | 19758 | 19769 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85090726 |
| 29. | NW_001092316 | GAC | 9 | 19982 | 20007 | 26 | 33.33% | 0.00% | 33.33% | 33.33% | 85090726 |
| 30. | NW_001092316 | CAA | 5 | 20775 | 20789 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85090726 |
| 31. | NW_001092316 | TAC | 6 | 21546 | 21563 | 18 | 33.33% | 33.33% | 0.00% | 33.33% | 85090726 |
| 32. | NW_001092316 | GAG | 4 | 23348 | 23358 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 33. | NW_001092316 | TCC | 8 | 25031 | 25054 | 24 | 0.00% | 33.33% | 0.00% | 66.67% | 85090728 |
| 34. | NW_001092316 | GTG | 4 | 25396 | 25407 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85090728 |
| 35. | NW_001092316 | ATG | 4 | 29124 | 29135 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85090730 |
| 36. | NW_001092316 | CAA | 4 | 31044 | 31055 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 37. | NW_001092316 | CCT | 4 | 31658 | 31669 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 38. | NW_001092316 | CAA | 4 | 33239 | 33253 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85090732 |
| 39. | NW_001092316 | AGA | 4 | 33415 | 33426 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85090732 |
| 40. | NW_001092316 | TCA | 4 | 36809 | 36820 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 41. | NW_001092316 | ATC | 4 | 38272 | 38283 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85090736 |
| 42. | NW_001092316 | GCA | 5 | 40262 | 40276 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85090736 |
| 43. | NW_001092316 | GCC | 4 | 40271 | 40282 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85090736 |
| 44. | NW_001092316 | GGC | 4 | 42539 | 42550 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85090738 |
| 45. | NW_001092316 | CGG | 5 | 42879 | 42892 | 14 | 0.00% | 0.00% | 66.67% | 33.33% | 85090738 |
| 46. | NW_001092316 | TGT | 9 | 42989 | 43013 | 25 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 47. | NW_001092316 | GCC | 4 | 44626 | 44637 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85090740 |
| 48. | NW_001092316 | TCC | 4 | 46030 | 46041 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85090742 |
| 49. | NW_001092316 | CAC | 9 | 46347 | 46372 | 26 | 33.33% | 0.00% | 0.00% | 66.67% | 85090742 |
| 50. | NW_001092316 | GTT | 5 | 46713 | 46727 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85090742 |
| 51. | NW_001092316 | GTG | 4 | 48431 | 48442 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 52. | NW_001092316 | AGA | 4 | 49877 | 49887 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 53. | NW_001092316 | TCA | 4 | 51496 | 51507 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85090746 |
| 54. | NW_001092316 | CAG | 4 | 55053 | 55064 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85090750 |
| 55. | NW_001092316 | CAT | 4 | 55062 | 55073 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85090750 |
| 56. | NW_001092316 | AGG | 4 | 56905 | 56916 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85090750 |
| 57. | NW_001092316 | AGA | 4 | 58489 | 58501 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | 85090750 |
| 58. | NW_001092316 | GAC | 4 | 58746 | 58757 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85090750 |
| 59. | NW_001092316 | GAG | 5 | 58833 | 58847 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85090750 |
| 60. | NW_001092316 | GAC | 4 | 58875 | 58886 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85090750 |
| 61. | NW_001092316 | CGT | 4 | 59112 | 59122 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85090750 |
| 62. | NW_001092316 | TGT | 4 | 60084 | 60095 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 63. | NW_001092316 | ATC | 4 | 60404 | 60414 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 64. | NW_001092316 | ACT | 4 | 60489 | 60499 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 65. | NW_001092316 | TTA | 4 | 60948 | 60958 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 66. | NW_001092316 | TAT | 4 | 62160 | 62170 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |