List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092316 | AGCG | 3 | 3875 | 3885 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 2. | NW_001092316 | CAGC | 3 | 5659 | 5669 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85090720 |
| 3. | NW_001092316 | GTTC | 3 | 8482 | 8492 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | 85090720 |
| 4. | NW_001092316 | GAAG | 6 | 9054 | 9077 | 24 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 5. | NW_001092316 | TGAC | 3 | 9265 | 9275 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 6. | NW_001092316 | GGGA | 3 | 11672 | 11683 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 7. | NW_001092316 | CATC | 3 | 12010 | 12021 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 8. | NW_001092316 | CCGT | 3 | 15263 | 15274 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 9. | NW_001092316 | GTAG | 3 | 15551 | 15562 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 10. | NW_001092316 | CCTT | 3 | 17321 | 17331 | 11 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 11. | NW_001092316 | GTAT | 3 | 20927 | 20938 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | 85090726 |
| 12. | NW_001092316 | GGGA | 3 | 24351 | 24362 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 13. | NW_001092316 | AAGG | 3 | 24419 | 24430 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 14. | NW_001092316 | CATG | 3 | 25676 | 25687 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 85090728 |
| 15. | NW_001092316 | GCAT | 3 | 26854 | 26864 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 85090730 |
| 16. | NW_001092316 | CGAT | 3 | 29549 | 29560 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 17. | NW_001092316 | GTGC | 3 | 30283 | 30294 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 18. | NW_001092316 | CACT | 3 | 32544 | 32555 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 19. | NW_001092316 | CCAA | 3 | 32807 | 32817 | 11 | 50.00% | 0.00% | 0.00% | 50.00% | 85090732 |
| 20. | NW_001092316 | ATGG | 3 | 34058 | 34068 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 21. | NW_001092316 | ATGT | 3 | 34643 | 34653 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 22. | NW_001092316 | GCCC | 3 | 36360 | 36371 | 12 | 0.00% | 0.00% | 25.00% | 75.00% | Non-Coding |
| 23. | NW_001092316 | CCAA | 5 | 36860 | 36879 | 20 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 24. | NW_001092316 | GTGA | 5 | 37733 | 37752 | 20 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 25. | NW_001092316 | CTAC | 3 | 40974 | 40985 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 26. | NW_001092316 | CATC | 6 | 41937 | 41960 | 24 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 27. | NW_001092316 | TGAG | 3 | 42678 | 42689 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 85090738 |
| 28. | NW_001092316 | TGGA | 3 | 42705 | 42715 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | 85090738 |
| 29. | NW_001092316 | CTTC | 3 | 46314 | 46325 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 85090742 |
| 30. | NW_001092316 | CTGG | 3 | 46647 | 46657 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | 85090742 |
| 31. | NW_001092316 | GGGA | 3 | 46940 | 46951 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 32. | NW_001092316 | GGTT | 3 | 48621 | 48632 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 33. | NW_001092316 | TCCT | 3 | 48894 | 48905 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 34. | NW_001092316 | TTAG | 3 | 49149 | 49160 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 35. | NW_001092316 | AATG | 3 | 49743 | 49753 | 11 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 36. | NW_001092316 | CTTC | 3 | 53124 | 53135 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 85090748 |
| 37. | NW_001092316 | AATG | 3 | 54162 | 54174 | 13 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 38. | NW_001092316 | ACCT | 3 | 55542 | 55552 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85090750 |
| 39. | NW_001092316 | CTCG | 3 | 59576 | 59588 | 13 | 0.00% | 25.00% | 25.00% | 50.00% | 85090750 |
| 40. | NW_001092316 | GCTG | 3 | 60026 | 60037 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 41. | NW_001092316 | TAGG | 4 | 60506 | 60521 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 42. | NW_001092316 | CGTT | 3 | 60885 | 60896 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 43. | NW_001092316 | AAGT | 3 | 62006 | 62017 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |