List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092310 | CTG | 4 | 5215 | 5226 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 2. | NW_001092310 | AAG | 4 | 5669 | 5680 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 3. | NW_001092310 | CCA | 4 | 6157 | 6168 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 4. | NW_001092310 | GAA | 4 | 8348 | 8358 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 5. | NW_001092310 | ACA | 5 | 9225 | 9239 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85090562 |
| 6. | NW_001092310 | CCG | 4 | 9923 | 9934 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85090562 |
| 7. | NW_001092310 | GCG | 5 | 11213 | 11227 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85090562 |
| 8. | NW_001092310 | ACA | 4 | 11263 | 11274 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85090562 |
| 9. | NW_001092310 | GAC | 4 | 11610 | 11620 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 10. | NW_001092310 | GAG | 4 | 12849 | 12860 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 11. | NW_001092310 | GCA | 6 | 14115 | 14135 | 21 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 12. | NW_001092310 | GTT | 4 | 15596 | 15608 | 13 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 13. | NW_001092310 | GAT | 4 | 16041 | 16051 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 14. | NW_001092310 | TGA | 4 | 16103 | 16114 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 15. | NW_001092310 | CAA | 4 | 16123 | 16134 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 16. | NW_001092310 | AAC | 4 | 16142 | 16152 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 17. | NW_001092310 | GTC | 4 | 17661 | 17672 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85090564 |
| 18. | NW_001092310 | TCG | 4 | 17722 | 17733 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85090564 |
| 19. | NW_001092310 | TCG | 4 | 17791 | 17802 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85090564 |
| 20. | NW_001092310 | CTC | 9 | 17850 | 17876 | 27 | 0.00% | 33.33% | 0.00% | 66.67% | 85090564 |
| 21. | NW_001092310 | TCC | 4 | 18169 | 18180 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85090564 |
| 22. | NW_001092310 | TTC | 4 | 18305 | 18316 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85090564 |
| 23. | NW_001092310 | GTC | 4 | 18463 | 18474 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85090564 |
| 24. | NW_001092310 | CGG | 4 | 21402 | 21412 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 25. | NW_001092310 | CTC | 4 | 21559 | 21569 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85090568 |
| 26. | NW_001092310 | CTT | 8 | 21743 | 21766 | 24 | 0.00% | 66.67% | 0.00% | 33.33% | 85090568 |
| 27. | NW_001092310 | AAC | 5 | 25500 | 25514 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 28. | NW_001092310 | GAC | 4 | 25515 | 25525 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 29. | NW_001092310 | GCG | 5 | 25529 | 25543 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 30. | NW_001092310 | CAG | 4 | 25685 | 25696 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 31. | NW_001092310 | GTT | 4 | 25908 | 25919 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 32. | NW_001092310 | GAC | 4 | 28330 | 28341 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 33. | NW_001092310 | GAC | 4 | 30660 | 30671 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85090574 |
| 34. | NW_001092310 | CAA | 4 | 31217 | 31228 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85090574 |
| 35. | NW_001092310 | GCA | 5 | 31643 | 31656 | 14 | 33.33% | 0.00% | 33.33% | 33.33% | 85090574 |
| 36. | NW_001092310 | CGC | 4 | 31918 | 31929 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85090574 |
| 37. | NW_001092310 | CGC | 4 | 32351 | 32362 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85090574 |
| 38. | NW_001092310 | GGT | 4 | 32944 | 32955 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85090574 |
| 39. | NW_001092310 | GGA | 9 | 32953 | 32979 | 27 | 33.33% | 0.00% | 66.67% | 0.00% | 85090574 |
| 40. | NW_001092310 | GCG | 5 | 33185 | 33200 | 16 | 0.00% | 0.00% | 66.67% | 33.33% | 85090574 |
| 41. | NW_001092310 | GTG | 5 | 34179 | 34193 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 42. | NW_001092310 | ATC | 4 | 35515 | 35526 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85090576 |
| 43. | NW_001092310 | ACG | 4 | 37948 | 37959 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 44. | NW_001092310 | CGG | 5 | 38595 | 38609 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 45. | NW_001092310 | CAT | 4 | 38619 | 38630 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 46. | NW_001092310 | CAT | 7 | 39530 | 39550 | 21 | 33.33% | 33.33% | 0.00% | 33.33% | 85090578 |
| 47. | NW_001092310 | GTG | 5 | 41341 | 41355 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85090578 |
| 48. | NW_001092310 | GAA | 4 | 42471 | 42483 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 49. | NW_001092310 | CTG | 4 | 44160 | 44170 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85090580 |
| 50. | NW_001092310 | TGG | 4 | 49030 | 49041 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85090584 |
| 51. | NW_001092310 | CAG | 9 | 49137 | 49163 | 27 | 33.33% | 0.00% | 33.33% | 33.33% | 85090584 |
| 52. | NW_001092310 | GAA | 4 | 49176 | 49186 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 85090584 |
| 53. | NW_001092310 | GAG | 4 | 49780 | 49790 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 54. | NW_001092310 | CTT | 4 | 50789 | 50800 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85090586 |
| 55. | NW_001092310 | CAT | 4 | 50830 | 50841 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85090586 |
| 56. | NW_001092310 | TTG | 4 | 52598 | 52609 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85090586 |
| 57. | NW_001092310 | AGG | 4 | 54312 | 54323 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 58. | NW_001092310 | ATG | 8 | 54318 | 54341 | 24 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 59. | NW_001092310 | GAG | 4 | 54342 | 54353 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |