List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092310 | TGCT | 9 | 418 | 452 | 35 | 0.00% | 50.00% | 25.00% | 25.00% | 85090560 |
| 2. | NW_001092310 | TTTC | 5 | 3884 | 3902 | 19 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 3. | NW_001092310 | TAGG | 4 | 5497 | 5512 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 4. | NW_001092310 | TAGG | 3 | 5521 | 5532 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 5. | NW_001092310 | CAAG | 3 | 5642 | 5652 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 6. | NW_001092310 | GGAG | 3 | 9991 | 10003 | 13 | 25.00% | 0.00% | 75.00% | 0.00% | 85090562 |
| 7. | NW_001092310 | GAGT | 3 | 11731 | 11741 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 8. | NW_001092310 | TTTC | 3 | 11778 | 11788 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 9. | NW_001092310 | TTGG | 3 | 15938 | 15949 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 10. | NW_001092310 | GAGG | 3 | 19115 | 19126 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 11. | NW_001092310 | TTTA | 3 | 19752 | 19763 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001092310 | AGCG | 3 | 20751 | 20761 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | 85090566 |
| 13. | NW_001092310 | TACA | 3 | 24053 | 24063 | 11 | 50.00% | 25.00% | 0.00% | 25.00% | 85090568 |
| 14. | NW_001092310 | AGGC | 3 | 24544 | 24554 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 15. | NW_001092310 | CGAA | 3 | 25567 | 25578 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 16. | NW_001092310 | ATGC | 4 | 26544 | 26558 | 15 | 25.00% | 25.00% | 25.00% | 25.00% | 85090570 |
| 17. | NW_001092310 | AAGG | 3 | 26871 | 26882 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | 85090570 |
| 18. | NW_001092310 | CTCG | 3 | 27944 | 27955 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 19. | NW_001092310 | GACT | 3 | 31435 | 31446 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 85090574 |
| 20. | NW_001092310 | ACGT | 3 | 33510 | 33522 | 13 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 21. | NW_001092310 | GTCA | 7 | 33615 | 33642 | 28 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 22. | NW_001092310 | ACCT | 10 | 33731 | 33771 | 41 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 23. | NW_001092310 | TACC | 3 | 33977 | 33988 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 24. | NW_001092310 | GCGA | 3 | 35252 | 35263 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | 85090576 |
| 25. | NW_001092310 | CTGC | 3 | 35538 | 35548 | 11 | 0.00% | 25.00% | 25.00% | 50.00% | 85090576 |
| 26. | NW_001092310 | TAGA | 3 | 38500 | 38511 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 27. | NW_001092310 | AACC | 3 | 47907 | 47918 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 28. | NW_001092310 | CCGA | 3 | 48797 | 48808 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 85090584 |
| 29. | NW_001092310 | CCAA | 3 | 50504 | 50514 | 11 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 30. | NW_001092310 | CGGG | 3 | 53992 | 54003 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 31. | NW_001092310 | GTAG | 3 | 54058 | 54070 | 13 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |