List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092309 | TAA | 4 | 817 | 827 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092309 | TAT | 4 | 991 | 1001 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092309 | TAA | 4 | 1104 | 1115 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092309 | TAT | 5 | 1557 | 1571 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 5. | NW_001092309 | TTA | 4 | 1601 | 1612 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092309 | TTA | 5 | 1622 | 1636 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 7. | NW_001092309 | ATA | 4 | 2482 | 2492 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001092309 | CTA | 4 | 2526 | 2536 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 9. | NW_001092309 | GAA | 4 | 3091 | 3102 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 10. | NW_001092309 | CTC | 4 | 4118 | 4128 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 11. | NW_001092309 | TCT | 5 | 7309 | 7322 | 14 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 12. | NW_001092309 | TGA | 4 | 12711 | 12721 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 13. | NW_001092309 | TCC | 4 | 13241 | 13252 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85090525 |
| 14. | NW_001092309 | CAC | 4 | 20453 | 20464 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85090531 |
| 15. | NW_001092309 | GGA | 5 | 21555 | 21570 | 16 | 33.33% | 0.00% | 66.67% | 0.00% | 85090533 |
| 16. | NW_001092309 | GAC | 4 | 22095 | 22105 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85090533 |
| 17. | NW_001092309 | TGG | 4 | 22381 | 22392 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85090533 |
| 18. | NW_001092309 | GTG | 4 | 24159 | 24170 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 19. | NW_001092309 | ATG | 4 | 25250 | 25261 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85090537 |
| 20. | NW_001092309 | TGC | 4 | 26955 | 26966 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85090537 |
| 21. | NW_001092309 | TGT | 4 | 27784 | 27795 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85090537 |
| 22. | NW_001092309 | GCT | 4 | 30800 | 30810 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85090539 |
| 23. | NW_001092309 | CGT | 4 | 32306 | 32317 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85090541 |
| 24. | NW_001092309 | CTC | 4 | 32759 | 32770 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85090541 |
| 25. | NW_001092309 | CAT | 4 | 34971 | 34982 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 26. | NW_001092309 | AAT | 4 | 35340 | 35351 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | 85090545 |
| 27. | NW_001092309 | AGT | 4 | 35431 | 35442 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85090545 |
| 28. | NW_001092309 | GAT | 4 | 36167 | 36178 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 29. | NW_001092309 | CAA | 4 | 36422 | 36433 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 30. | NW_001092309 | GAG | 4 | 37621 | 37632 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85090549 |
| 31. | NW_001092309 | GCC | 7 | 39146 | 39166 | 21 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 32. | NW_001092309 | ACA | 4 | 40469 | 40480 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 33. | NW_001092309 | TGG | 4 | 41345 | 41356 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 34. | NW_001092309 | GAC | 4 | 44424 | 44435 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85090553 |
| 35. | NW_001092309 | GAG | 4 | 47270 | 47282 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 85090555 |
| 36. | NW_001092309 | CAT | 4 | 49962 | 49973 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 37. | NW_001092309 | TTA | 4 | 50258 | 50268 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 38. | NW_001092309 | TAA | 4 | 51167 | 51177 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 39. | NW_001092309 | TAC | 4 | 51279 | 51291 | 13 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 40. | NW_001092309 | TAA | 5 | 51584 | 51599 | 16 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 41. | NW_001092309 | ATT | 4 | 51953 | 51964 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 42. | NW_001092309 | TAG | 4 | 52427 | 52437 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |