List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092309 | TAAG | 3 | 52 | 62 | 11 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 2. | NW_001092309 | AATT | 3 | 552 | 562 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092309 | TTTA | 3 | 828 | 839 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092309 | TAAT | 3 | 867 | 878 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 5. | NW_001092309 | TAGA | 3 | 1572 | 1583 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 6. | NW_001092309 | AATA | 3 | 2783 | 2795 | 13 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 7. | NW_001092309 | TCCA | 3 | 9525 | 9535 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 8. | NW_001092309 | CTTC | 3 | 9541 | 9552 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 9. | NW_001092309 | TTCC | 3 | 11666 | 11677 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 10. | NW_001092309 | TTCC | 3 | 12140 | 12150 | 11 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 11. | NW_001092309 | GGCA | 3 | 17602 | 17612 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | 85090531 |
| 12. | NW_001092309 | GCAA | 3 | 18651 | 18661 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | 85090531 |
| 13. | NW_001092309 | TGCA | 3 | 20777 | 20788 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 85090533 |
| 14. | NW_001092309 | CGAA | 3 | 23243 | 23254 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 15. | NW_001092309 | TAGC | 3 | 23325 | 23335 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 16. | NW_001092309 | GCAG | 3 | 24957 | 24969 | 13 | 25.00% | 0.00% | 50.00% | 25.00% | 85090537 |
| 17. | NW_001092309 | CTGG | 3 | 27513 | 27525 | 13 | 0.00% | 25.00% | 50.00% | 25.00% | 85090537 |
| 18. | NW_001092309 | TAGG | 3 | 31659 | 31670 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 19. | NW_001092309 | ACTG | 3 | 32388 | 32398 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 85090541 |
| 20. | NW_001092309 | AAAG | 3 | 33189 | 33199 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 21. | NW_001092309 | ATCA | 3 | 34589 | 34600 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 22. | NW_001092309 | AGGG | 4 | 34639 | 34654 | 16 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 23. | NW_001092309 | CTTC | 3 | 34935 | 34946 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 24. | NW_001092309 | CAAC | 4 | 35067 | 35082 | 16 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 25. | NW_001092309 | CACC | 4 | 35137 | 35152 | 16 | 25.00% | 0.00% | 0.00% | 75.00% | 85090545 |
| 26. | NW_001092309 | TCCA | 3 | 36500 | 36510 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85090547 |
| 27. | NW_001092309 | AGCT | 3 | 37031 | 37042 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 28. | NW_001092309 | AGAA | 4 | 37600 | 37614 | 15 | 75.00% | 0.00% | 25.00% | 0.00% | 85090549 |
| 29. | NW_001092309 | CTAC | 3 | 41487 | 41498 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 30. | NW_001092309 | TGTT | 3 | 42397 | 42408 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 31. | NW_001092309 | CAAC | 3 | 45622 | 45633 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 32. | NW_001092309 | TACA | 4 | 46742 | 46756 | 15 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 33. | NW_001092309 | GGAG | 3 | 49423 | 49434 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 34. | NW_001092309 | TCAA | 3 | 49816 | 49827 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 35. | NW_001092309 | CTAT | 3 | 50644 | 50654 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 36. | NW_001092309 | CTTA | 3 | 50901 | 50911 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 37. | NW_001092309 | TATT | 3 | 52488 | 52500 | 13 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |