List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092297 | TAT | 4 | 992 | 1003 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092297 | TTA | 4 | 1311 | 1321 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092297 | TAA | 4 | 2506 | 2517 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092297 | GCT | 4 | 3534 | 3545 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 5. | NW_001092297 | ATA | 4 | 4036 | 4046 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092297 | AGA | 4 | 4462 | 4473 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 7. | NW_001092297 | ATA | 4 | 5498 | 5509 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001092297 | AGT | 4 | 5727 | 5737 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 9. | NW_001092297 | ATT | 4 | 6654 | 6664 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 10. | NW_001092297 | TTA | 4 | 6772 | 6782 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 11. | NW_001092297 | TAA | 4 | 7570 | 7581 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001092297 | TAG | 4 | 8459 | 8469 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 13. | NW_001092297 | TAA | 4 | 8915 | 8926 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 14. | NW_001092297 | TAA | 5 | 9615 | 9628 | 14 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 15. | NW_001092297 | CTT | 4 | 10921 | 10932 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 16. | NW_001092297 | TAG | 4 | 11631 | 11642 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 17. | NW_001092297 | GTA | 4 | 11718 | 11728 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 18. | NW_001092297 | TAA | 5 | 12121 | 12135 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 19. | NW_001092297 | ATT | 4 | 12194 | 12205 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 20. | NW_001092297 | TTA | 5 | 12658 | 12673 | 16 | 33.33% | 66.67% | 0.00% | 0.00% | 85090277 |
| 21. | NW_001092297 | ATA | 4 | 12951 | 12961 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | 85090277 |
| 22. | NW_001092297 | CTA | 4 | 13269 | 13280 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 23. | NW_001092297 | AAT | 4 | 13437 | 13448 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 24. | NW_001092297 | AAT | 5 | 13588 | 13602 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 25. | NW_001092297 | AAT | 4 | 13948 | 13960 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 26. | NW_001092297 | TAT | 4 | 14178 | 14189 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 27. | NW_001092297 | TAA | 4 | 14337 | 14348 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 28. | NW_001092297 | AGA | 4 | 15448 | 15459 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 29. | NW_001092297 | ATT | 4 | 15939 | 15950 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 30. | NW_001092297 | TAA | 4 | 16016 | 16026 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 31. | NW_001092297 | TAA | 4 | 16340 | 16350 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 32. | NW_001092297 | TAC | 4 | 17284 | 17295 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 33. | NW_001092297 | GAG | 4 | 17862 | 17873 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 34. | NW_001092297 | ATA | 4 | 18657 | 18667 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 35. | NW_001092297 | AAG | 4 | 19274 | 19285 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 36. | NW_001092297 | TAT | 9 | 19597 | 19624 | 28 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 37. | NW_001092297 | TAT | 4 | 21188 | 21200 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 38. | NW_001092297 | TAT | 4 | 23869 | 23880 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 39. | NW_001092297 | TAA | 4 | 24157 | 24168 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 40. | NW_001092297 | GTA | 4 | 25266 | 25276 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 41. | NW_001092297 | TAG | 4 | 26706 | 26716 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 42. | NW_001092297 | TTA | 4 | 27632 | 27643 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 43. | NW_001092297 | GAA | 4 | 27696 | 27707 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 44. | NW_001092297 | GAG | 4 | 28069 | 28080 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 45. | NW_001092297 | AAT | 4 | 28344 | 28355 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 46. | NW_001092297 | AAT | 4 | 28452 | 28463 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 47. | NW_001092297 | ATA | 4 | 28866 | 28876 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 48. | NW_001092297 | GAA | 4 | 29071 | 29083 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 49. | NW_001092297 | ATA | 4 | 30114 | 30126 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 50. | NW_001092297 | CTT | 4 | 32102 | 32113 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 51. | NW_001092297 | TAA | 5 | 34710 | 34724 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 52. | NW_001092297 | TAA | 4 | 34773 | 34783 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 53. | NW_001092297 | TAC | 4 | 35905 | 35915 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 54. | NW_001092297 | ATA | 4 | 35964 | 35975 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 55. | NW_001092297 | TCT | 4 | 36943 | 36954 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 56. | NW_001092297 | TAT | 4 | 37189 | 37200 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 57. | NW_001092297 | TTA | 5 | 37467 | 37480 | 14 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 58. | NW_001092297 | TAA | 5 | 37654 | 37668 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 59. | NW_001092297 | TAT | 4 | 38292 | 38303 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 60. | NW_001092297 | TAA | 4 | 39275 | 39286 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 61. | NW_001092297 | GGA | 4 | 39714 | 39724 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 62. | NW_001092297 | ATT | 5 | 40351 | 40365 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 63. | NW_001092297 | GTA | 4 | 41137 | 41148 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 64. | NW_001092297 | TAT | 4 | 41953 | 41963 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 65. | NW_001092297 | ATT | 4 | 42284 | 42296 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 66. | NW_001092297 | AAT | 4 | 42334 | 42344 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |