List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092285 | TAT | 4 | 500 | 512 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092285 | TAT | 4 | 784 | 795 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092285 | TAT | 4 | 2259 | 2270 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092285 | TAG | 4 | 2298 | 2309 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 5. | NW_001092285 | AAG | 4 | 2349 | 2360 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 6. | NW_001092285 | CTA | 4 | 2984 | 2994 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 7. | NW_001092285 | TCC | 4 | 3663 | 3673 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 8. | NW_001092285 | CTA | 4 | 3689 | 3700 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 9. | NW_001092285 | TAA | 4 | 4951 | 4962 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 10. | NW_001092285 | AAT | 4 | 5132 | 5143 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 11. | NW_001092285 | ATT | 4 | 5430 | 5441 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001092285 | AAT | 4 | 6754 | 6765 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 13. | NW_001092285 | TAA | 4 | 8189 | 8200 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 14. | NW_001092285 | TAT | 4 | 9087 | 9098 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | 85090083 |
| 15. | NW_001092285 | TAT | 5 | 9524 | 9538 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | 85090083 |
| 16. | NW_001092285 | AAG | 4 | 10045 | 10056 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 17. | NW_001092285 | ATT | 4 | 10473 | 10484 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 18. | NW_001092285 | ATT | 4 | 11078 | 11090 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 19. | NW_001092285 | ACT | 4 | 11900 | 11911 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 20. | NW_001092285 | TTA | 4 | 15077 | 15087 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 21. | NW_001092285 | ATA | 4 | 15936 | 15947 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 22. | NW_001092285 | GGT | 4 | 16339 | 16350 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 23. | NW_001092285 | AGA | 4 | 16438 | 16448 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 24. | NW_001092285 | ATT | 4 | 16557 | 16568 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 25. | NW_001092285 | TAG | 4 | 16746 | 16756 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 26. | NW_001092285 | CTC | 5 | 16862 | 16875 | 14 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 27. | NW_001092285 | CTT | 4 | 16917 | 16927 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 28. | NW_001092285 | TTA | 4 | 16982 | 16992 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 29. | NW_001092285 | AAG | 4 | 17196 | 17207 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 30. | NW_001092285 | TAC | 5 | 17208 | 17222 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 31. | NW_001092285 | AAT | 4 | 17570 | 17581 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 32. | NW_001092285 | AGT | 4 | 17935 | 17946 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 33. | NW_001092285 | ATA | 4 | 18592 | 18606 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 34. | NW_001092285 | TAA | 4 | 19919 | 19929 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 35. | NW_001092285 | TAA | 4 | 20084 | 20095 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 36. | NW_001092285 | AGT | 4 | 20775 | 20785 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 37. | NW_001092285 | TAT | 4 | 20949 | 20959 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 38. | NW_001092285 | ATA | 4 | 21623 | 21635 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 39. | NW_001092285 | ATA | 4 | 22225 | 22235 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 40. | NW_001092285 | TTA | 5 | 22635 | 22649 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 41. | NW_001092285 | GTA | 4 | 23878 | 23889 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 42. | NW_001092285 | AGA | 4 | 24071 | 24081 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 43. | NW_001092285 | TAT | 10 | 25880 | 25908 | 29 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 44. | NW_001092285 | ATC | 4 | 28027 | 28037 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85090085 |
| 45. | NW_001092285 | AGA | 4 | 28761 | 28772 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85090085 |
| 46. | NW_001092285 | CTG | 4 | 29345 | 29356 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85090087 |
| 47. | NW_001092285 | AAG | 4 | 29895 | 29907 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | 85090087 |
| 48. | NW_001092285 | TTC | 4 | 35117 | 35128 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |