List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092023 | TCAA | 3 | 1294 | 1304 | 11 | 50.00% | 25.00% | 0.00% | 25.00% | 85082015 |
| 2. | NW_001092023 | CTGG | 3 | 2413 | 2424 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | 85082015 |
| 3. | NW_001092023 | CGGC | 3 | 5395 | 5406 | 12 | 0.00% | 0.00% | 50.00% | 50.00% | 85082020 |
| 4. | NW_001092023 | TACC | 3 | 7667 | 7677 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 5. | NW_001092023 | CAGT | 3 | 8023 | 8033 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 6. | NW_001092023 | GTAC | 3 | 8312 | 8323 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 7. | NW_001092023 | CCAC | 3 | 12968 | 12979 | 12 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 8. | NW_001092023 | GGAT | 6 | 15099 | 15122 | 24 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 9. | NW_001092023 | CAAC | 3 | 18729 | 18741 | 13 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 10. | NW_001092023 | CTTT | 5 | 22099 | 22119 | 21 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 11. | NW_001092023 | CACT | 3 | 22339 | 22350 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 12. | NW_001092023 | AGCA | 3 | 23569 | 23579 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 13. | NW_001092023 | TGGT | 3 | 24906 | 24916 | 11 | 0.00% | 50.00% | 50.00% | 0.00% | 85082048 |
| 14. | NW_001092023 | CCGA | 3 | 25608 | 25619 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 15. | NW_001092023 | GATA | 3 | 26692 | 26702 | 11 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 16. | NW_001092023 | TATT | 3 | 26751 | 26762 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 17. | NW_001092023 | TATT | 4 | 26849 | 26864 | 16 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 18. | NW_001092023 | GAAA | 3 | 28616 | 28626 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 19. | NW_001092023 | AAAT | 3 | 30832 | 30842 | 11 | 75.00% | 25.00% | 0.00% | 0.00% | 85082052 |
| 20. | NW_001092023 | CTAT | 3 | 31867 | 31877 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 21. | NW_001092023 | AATT | 3 | 32588 | 32598 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 22. | NW_001092023 | AACC | 3 | 33403 | 33413 | 11 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 23. | NW_001092023 | ATCA | 3 | 35033 | 35045 | 13 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 24. | NW_001092023 | CTTC | 14 | 38842 | 38897 | 56 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 25. | NW_001092023 | AAGG | 3 | 42162 | 42173 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | 85082064 |
| 26. | NW_001092023 | TGGT | 3 | 42269 | 42280 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 27. | NW_001092023 | CAGT | 3 | 43818 | 43828 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 85082069 |
| 28. | NW_001092023 | CGAT | 3 | 44642 | 44653 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 85082069 |
| 29. | NW_001092023 | CAAC | 4 | 45657 | 45672 | 16 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 30. | NW_001092023 | GTAG | 3 | 47999 | 48011 | 13 | 25.00% | 25.00% | 50.00% | 0.00% | 85082077 |
| 31. | NW_001092023 | TCCA | 3 | 50174 | 50184 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85082081 |
| 32. | NW_001092023 | CCTA | 3 | 55892 | 55903 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 33. | NW_001092023 | CAAG | 3 | 56412 | 56423 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 34. | NW_001092023 | TCCT | 3 | 56747 | 56758 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 35. | NW_001092023 | AACA | 3 | 57863 | 57874 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 36. | NW_001092023 | GTGG | 4 | 60352 | 60367 | 16 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 37. | NW_001092023 | GCGG | 4 | 60442 | 60457 | 16 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 38. | NW_001092023 | CTAC | 3 | 60607 | 60618 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 39. | NW_001092023 | TTCC | 3 | 62693 | 62703 | 11 | 0.00% | 50.00% | 0.00% | 50.00% | 85082101 |
| 40. | NW_001092023 | CCCT | 3 | 65887 | 65897 | 11 | 0.00% | 25.00% | 0.00% | 75.00% | 85082104 |
| 41. | NW_001092023 | GAAA | 3 | 67383 | 67394 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 85082104 |
| 42. | NW_001092023 | ATGA | 3 | 67396 | 67407 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | 85082104 |
| 43. | NW_001092023 | AAGT | 3 | 71918 | 71929 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 44. | NW_001092023 | GGTA | 3 | 72109 | 72120 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 45. | NW_001092023 | ATCC | 3 | 74578 | 74589 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 46. | NW_001092023 | TCTT | 6 | 74939 | 74962 | 24 | 0.00% | 75.00% | 0.00% | 25.00% | 85082116 |
| 47. | NW_001092023 | GCCG | 3 | 77094 | 77105 | 12 | 0.00% | 0.00% | 50.00% | 50.00% | Non-Coding |
| 48. | NW_001092023 | GGAA | 3 | 80437 | 80449 | 13 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 49. | NW_001092023 | GCAT | 3 | 80497 | 80508 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 50. | NW_001092023 | GTTT | 3 | 82002 | 82013 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | 85082128 |
| 51. | NW_001092023 | GTGG | 3 | 82605 | 82615 | 11 | 0.00% | 25.00% | 75.00% | 0.00% | 85082128 |
| 52. | NW_001092023 | GGGA | 3 | 82759 | 82770 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 53. | NW_001092023 | TGGC | 3 | 87742 | 87752 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 54. | NW_001092023 | AATA | 3 | 95424 | 95434 | 11 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 55. | NW_001092023 | TTCT | 3 | 98216 | 98227 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 85082151 |
| 56. | NW_001092023 | CAAG | 3 | 101400 | 101410 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 57. | NW_001092023 | TAGG | 3 | 103147 | 103158 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 58. | NW_001092023 | CGTT | 3 | 103650 | 103661 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 59. | NW_001092023 | CGAC | 6 | 103876 | 103899 | 24 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 60. | NW_001092023 | AGCC | 3 | 104366 | 104377 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 85082158 |
| 61. | NW_001092023 | CTGT | 3 | 104829 | 104840 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | 85082158 |
| 62. | NW_001092023 | TCCA | 3 | 108417 | 108428 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85082162 |
| 63. | NW_001092023 | CTTC | 3 | 110482 | 110492 | 11 | 0.00% | 50.00% | 0.00% | 50.00% | 85082162 |
| 64. | NW_001092023 | CTGG | 3 | 111314 | 111326 | 13 | 0.00% | 25.00% | 50.00% | 25.00% | 85082162 |
| 65. | NW_001092023 | GATC | 4 | 111978 | 111993 | 16 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 66. | NW_001092023 | TTGG | 3 | 112919 | 112929 | 11 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 67. | NW_001092023 | GCAT | 5 | 113395 | 113414 | 20 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 68. | NW_001092023 | GATA | 4 | 113471 | 113486 | 16 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |