List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092020 | CAC | 4 | 501 | 512 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 2. | NW_001092020 | GTC | 8 | 1089 | 1112 | 24 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 3. | NW_001092020 | TGC | 4 | 2906 | 2918 | 13 | 0.00% | 33.33% | 33.33% | 33.33% | 85081549 |
| 4. | NW_001092020 | AAG | 4 | 4449 | 4460 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 5. | NW_001092020 | CTT | 4 | 4917 | 4927 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85081553 |
| 6. | NW_001092020 | TGG | 8 | 5148 | 5171 | 24 | 0.00% | 33.33% | 66.67% | 0.00% | 85081553 |
| 7. | NW_001092020 | AGG | 8 | 5166 | 5189 | 24 | 33.33% | 0.00% | 66.67% | 0.00% | 85081553 |
| 8. | NW_001092020 | CGG | 5 | 5184 | 5198 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85081553 |
| 9. | NW_001092020 | TGG | 4 | 5193 | 5204 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85081553 |
| 10. | NW_001092020 | GTA | 4 | 6560 | 6570 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 11. | NW_001092020 | ACG | 4 | 12168 | 12179 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85081561 |
| 12. | NW_001092020 | AAG | 4 | 13665 | 13676 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85081561 |
| 13. | NW_001092020 | GGC | 4 | 15746 | 15757 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85081561 |
| 14. | NW_001092020 | GTT | 4 | 15886 | 15897 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 15. | NW_001092020 | ATG | 4 | 15943 | 15954 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 16. | NW_001092020 | CTG | 5 | 17646 | 17660 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85081565 |
| 17. | NW_001092020 | GTT | 5 | 17666 | 17680 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85081565 |
| 18. | NW_001092020 | CGT | 4 | 20820 | 20831 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 19. | NW_001092020 | GGC | 4 | 21402 | 21412 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | 85081569 |
| 20. | NW_001092020 | GAA | 4 | 21638 | 21648 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 21. | NW_001092020 | CTC | 5 | 24281 | 24295 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85081578 |
| 22. | NW_001092020 | TCT | 5 | 24463 | 24477 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85081578 |
| 23. | NW_001092020 | AAG | 4 | 25226 | 25237 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85081578 |
| 24. | NW_001092020 | CAC | 7 | 26005 | 26026 | 22 | 33.33% | 0.00% | 0.00% | 66.67% | 85081578 |
| 25. | NW_001092020 | GTG | 4 | 29636 | 29647 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 26. | NW_001092020 | ACG | 4 | 30569 | 30580 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 27. | NW_001092020 | TCC | 4 | 31998 | 32008 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 28. | NW_001092020 | AGA | 4 | 33233 | 33244 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85081586 |
| 29. | NW_001092020 | CTG | 4 | 38475 | 38485 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85081590 |
| 30. | NW_001092020 | GGA | 11 | 39580 | 39612 | 33 | 33.33% | 0.00% | 66.67% | 0.00% | 85081590 |
| 31. | NW_001092020 | AGA | 4 | 39655 | 39666 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85081590 |
| 32. | NW_001092020 | GTC | 4 | 40618 | 40629 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 33. | NW_001092020 | GAC | 4 | 41263 | 41274 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85081594 |
| 34. | NW_001092020 | GTG | 4 | 41981 | 41992 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85081594 |
| 35. | NW_001092020 | GGT | 7 | 42015 | 42036 | 22 | 0.00% | 33.33% | 66.67% | 0.00% | 85081594 |
| 36. | NW_001092020 | AGC | 5 | 43998 | 44012 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 37. | NW_001092020 | CAC | 4 | 46458 | 46470 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 38. | NW_001092020 | AGC | 9 | 47422 | 47448 | 27 | 33.33% | 0.00% | 33.33% | 33.33% | 85081602 |
| 39. | NW_001092020 | GGC | 7 | 47440 | 47460 | 21 | 0.00% | 0.00% | 66.67% | 33.33% | 85081602 |
| 40. | NW_001092020 | GCT | 6 | 50544 | 50560 | 17 | 0.00% | 33.33% | 33.33% | 33.33% | 85081606 |
| 41. | NW_001092020 | CAG | 4 | 51998 | 52010 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | 85081606 |
| 42. | NW_001092020 | TGT | 7 | 52429 | 52449 | 21 | 0.00% | 66.67% | 33.33% | 0.00% | 85081606 |
| 43. | NW_001092020 | CAC | 4 | 55341 | 55352 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85081610 |
| 44. | NW_001092020 | CAA | 4 | 55352 | 55364 | 13 | 66.67% | 0.00% | 0.00% | 33.33% | 85081610 |
| 45. | NW_001092020 | GGA | 6 | 56602 | 56620 | 19 | 33.33% | 0.00% | 66.67% | 0.00% | 85081610 |
| 46. | NW_001092020 | GAG | 14 | 56652 | 56694 | 43 | 33.33% | 0.00% | 66.67% | 0.00% | 85081610 |
| 47. | NW_001092020 | CTT | 4 | 57649 | 57661 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 48. | NW_001092020 | CGT | 4 | 58448 | 58458 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 49. | NW_001092020 | GAA | 4 | 58886 | 58897 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 50. | NW_001092020 | TAC | 4 | 61389 | 61401 | 13 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 51. | NW_001092020 | CCA | 12 | 61625 | 61661 | 37 | 33.33% | 0.00% | 0.00% | 66.67% | 85081614 |
| 52. | NW_001092020 | GAG | 4 | 61843 | 61854 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85081614 |
| 53. | NW_001092020 | AGA | 4 | 61969 | 61981 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | 85081614 |
| 54. | NW_001092020 | AAG | 4 | 65079 | 65090 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 55. | NW_001092020 | CAC | 4 | 65956 | 65966 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 56. | NW_001092020 | CAC | 5 | 66156 | 66169 | 14 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 57. | NW_001092020 | GAG | 4 | 66459 | 66470 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85081618 |
| 58. | NW_001092020 | CAT | 4 | 67817 | 67828 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85081618 |
| 59. | NW_001092020 | AAG | 4 | 68829 | 68840 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85081618 |
| 60. | NW_001092020 | GTT | 6 | 69181 | 69197 | 17 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 61. | NW_001092020 | TGT | 4 | 69219 | 69230 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 62. | NW_001092020 | TAC | 4 | 69427 | 69437 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 63. | NW_001092020 | GCG | 4 | 70314 | 70325 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 64. | NW_001092020 | CTG | 4 | 72179 | 72191 | 13 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 65. | NW_001092020 | CTA | 4 | 72939 | 72949 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85081626 |
| 66. | NW_001092020 | CAC | 4 | 72986 | 72997 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85081626 |
| 67. | NW_001092020 | CTT | 4 | 73981 | 73992 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85081626 |
| 68. | NW_001092020 | GCG | 4 | 74537 | 74547 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | 85081626 |
| 69. | NW_001092020 | AAG | 4 | 74820 | 74831 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 70. | NW_001092020 | GCA | 4 | 75884 | 75894 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 71. | NW_001092020 | TGG | 14 | 75900 | 75941 | 42 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 72. | NW_001092020 | GGT | 5 | 75904 | 75918 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 73. | NW_001092020 | ATG | 4 | 76353 | 76363 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 74. | NW_001092020 | TAG | 5 | 76622 | 76636 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 75. | NW_001092020 | CAA | 5 | 77341 | 77355 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85081635 |
| 76. | NW_001092020 | GCA | 4 | 78420 | 78430 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 77. | NW_001092020 | TCT | 4 | 78840 | 78852 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 78. | NW_001092020 | GAC | 12 | 80053 | 80086 | 34 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 79. | NW_001092020 | GGT | 5 | 80431 | 80446 | 16 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 80. | NW_001092020 | TCG | 4 | 81122 | 81133 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 81. | NW_001092020 | GCG | 4 | 81496 | 81506 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 82. | NW_001092020 | CCT | 11 | 82954 | 82986 | 33 | 0.00% | 33.33% | 0.00% | 66.67% | 85081643 |
| 83. | NW_001092020 | ACG | 4 | 84291 | 84301 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85081643 |
| 84. | NW_001092020 | CTC | 4 | 85318 | 85329 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85081647 |
| 85. | NW_001092020 | CTG | 9 | 85331 | 85357 | 27 | 0.00% | 33.33% | 33.33% | 33.33% | 85081647 |
| 86. | NW_001092020 | TTC | 4 | 85578 | 85588 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85081647 |
| 87. | NW_001092020 | TTC | 4 | 86627 | 86638 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85081647 |
| 88. | NW_001092020 | ATC | 4 | 89199 | 89210 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85081647 |
| 89. | NW_001092020 | TCA | 4 | 91962 | 91974 | 13 | 33.33% | 33.33% | 0.00% | 33.33% | 85081651 |
| 90. | NW_001092020 | ACA | 4 | 92665 | 92676 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85081651 |
| 91. | NW_001092020 | ACA | 7 | 92824 | 92845 | 22 | 66.67% | 0.00% | 0.00% | 33.33% | 85081651 |
| 92. | NW_001092020 | GAG | 4 | 93084 | 93095 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85081651 |
| 93. | NW_001092020 | ACA | 4 | 94712 | 94723 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 94. | NW_001092020 | AGT | 4 | 94946 | 94957 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 95. | NW_001092020 | ATG | 4 | 97577 | 97588 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 96. | NW_001092020 | TGG | 4 | 97941 | 97952 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 97. | NW_001092020 | TAG | 4 | 103424 | 103434 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 98. | NW_001092020 | ACT | 5 | 103487 | 103502 | 16 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 99. | NW_001092020 | ACA | 7 | 104678 | 104698 | 21 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 100. | NW_001092020 | TAT | 4 | 105391 | 105403 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |