List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092018 | ACC | 9 | 1001 | 1027 | 27 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 2. | NW_001092018 | ACC | 4 | 2088 | 2099 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85081263 |
| 3. | NW_001092018 | CAA | 4 | 2413 | 2424 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85081263 |
| 4. | NW_001092018 | CCA | 4 | 2428 | 2442 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85081263 |
| 5. | NW_001092018 | CAG | 4 | 3237 | 3248 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85081263 |
| 6. | NW_001092018 | CAG | 4 | 3435 | 3446 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85081263 |
| 7. | NW_001092018 | TCT | 4 | 3869 | 3881 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 8. | NW_001092018 | TCC | 5 | 4826 | 4840 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 9. | NW_001092018 | GGC | 5 | 4909 | 4923 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 10. | NW_001092018 | CGC | 5 | 5536 | 5550 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 85081267 |
| 11. | NW_001092018 | CTC | 4 | 9905 | 9916 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85081271 |
| 12. | NW_001092018 | CAC | 4 | 10246 | 10257 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85081271 |
| 13. | NW_001092018 | AAC | 4 | 11737 | 11748 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 14. | NW_001092018 | CAC | 5 | 13326 | 13340 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85081276 |
| 15. | NW_001092018 | GAG | 4 | 13439 | 13450 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85081276 |
| 16. | NW_001092018 | CAC | 4 | 14355 | 14366 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85081276 |
| 17. | NW_001092018 | ATG | 4 | 14883 | 14894 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85081276 |
| 18. | NW_001092018 | CAG | 4 | 15444 | 15455 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85081276 |
| 19. | NW_001092018 | GAA | 4 | 16027 | 16038 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85081276 |
| 20. | NW_001092018 | TCA | 4 | 16536 | 16546 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85081276 |
| 21. | NW_001092018 | AAC | 4 | 16736 | 16746 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | 85081276 |
| 22. | NW_001092018 | GCC | 4 | 18915 | 18925 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 23. | NW_001092018 | GCG | 4 | 19218 | 19229 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 24. | NW_001092018 | TCC | 4 | 20337 | 20348 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 25. | NW_001092018 | TCT | 4 | 20419 | 20430 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85081280 |
| 26. | NW_001092018 | AGC | 4 | 20520 | 20531 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85081280 |
| 27. | NW_001092018 | TCT | 5 | 24054 | 24068 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85081280 |
| 28. | NW_001092018 | CAT | 4 | 24322 | 24333 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85081280 |
| 29. | NW_001092018 | TCC | 5 | 25271 | 25285 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85081280 |
| 30. | NW_001092018 | ATC | 4 | 30224 | 30236 | 13 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 31. | NW_001092018 | TCC | 4 | 30581 | 30592 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85081287 |
| 32. | NW_001092018 | GTG | 5 | 31596 | 31610 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85081287 |
| 33. | NW_001092018 | TCC | 5 | 32859 | 32873 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85081291 |
| 34. | NW_001092018 | CGG | 4 | 33620 | 33631 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85081291 |
| 35. | NW_001092018 | TCT | 4 | 34612 | 34623 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85081291 |
| 36. | NW_001092018 | CGG | 4 | 34928 | 34939 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85081291 |
| 37. | NW_001092018 | CTG | 5 | 36995 | 37009 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85081295 |
| 38. | NW_001092018 | TTC | 4 | 37492 | 37502 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85081295 |
| 39. | NW_001092018 | TCC | 4 | 39021 | 39032 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85081295 |
| 40. | NW_001092018 | CTG | 4 | 39276 | 39287 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85081295 |
| 41. | NW_001092018 | TTG | 6 | 39543 | 39560 | 18 | 0.00% | 66.67% | 33.33% | 0.00% | 85081295 |
| 42. | NW_001092018 | TCA | 4 | 42170 | 42180 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 43. | NW_001092018 | CTA | 4 | 42850 | 42861 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 44. | NW_001092018 | GAA | 4 | 45878 | 45889 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85081304 |
| 45. | NW_001092018 | GAA | 4 | 46271 | 46282 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85081304 |
| 46. | NW_001092018 | GCA | 4 | 46490 | 46501 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85081304 |
| 47. | NW_001092018 | CAG | 4 | 46741 | 46751 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85081304 |
| 48. | NW_001092018 | GAT | 4 | 46887 | 46898 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85081304 |
| 49. | NW_001092018 | ACC | 7 | 47628 | 47648 | 21 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 50. | NW_001092018 | CAG | 4 | 47729 | 47740 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85081308 |
| 51. | NW_001092018 | CCA | 4 | 48341 | 48352 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85081308 |
| 52. | NW_001092018 | TTA | 4 | 49588 | 49599 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 53. | NW_001092018 | AGA | 5 | 49856 | 49870 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 54. | NW_001092018 | GTG | 4 | 52239 | 52251 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | 85081312 |
| 55. | NW_001092018 | TCT | 4 | 53785 | 53796 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85081312 |
| 56. | NW_001092018 | GGC | 5 | 53859 | 53872 | 14 | 0.00% | 0.00% | 66.67% | 33.33% | 85081312 |
| 57. | NW_001092018 | TTG | 4 | 58729 | 58739 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | 85081320 |
| 58. | NW_001092018 | CAA | 6 | 60975 | 60993 | 19 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 59. | NW_001092018 | GAT | 4 | 62018 | 62029 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 60. | NW_001092018 | TCC | 4 | 62098 | 62108 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 61. | NW_001092018 | GTC | 4 | 62623 | 62634 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85081324 |
| 62. | NW_001092018 | AGG | 5 | 64049 | 64063 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 63. | NW_001092018 | ACG | 4 | 64577 | 64588 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85081328 |
| 64. | NW_001092018 | GCT | 4 | 65593 | 65604 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85081328 |
| 65. | NW_001092018 | GAT | 4 | 65842 | 65853 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85081328 |
| 66. | NW_001092018 | AAG | 4 | 65869 | 65880 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85081328 |
| 67. | NW_001092018 | CTC | 4 | 67830 | 67840 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85081332 |
| 68. | NW_001092018 | GGA | 4 | 68672 | 68683 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85081332 |
| 69. | NW_001092018 | TTG | 4 | 70087 | 70097 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | 85081336 |
| 70. | NW_001092018 | TCC | 4 | 75437 | 75448 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 71. | NW_001092018 | ACA | 4 | 75592 | 75603 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 72. | NW_001092018 | GTC | 4 | 79779 | 79790 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 73. | NW_001092018 | ACC | 5 | 80655 | 80668 | 14 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 74. | NW_001092018 | GGC | 4 | 82122 | 82133 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85081348 |
| 75. | NW_001092018 | GCA | 4 | 86345 | 86355 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85081352 |
| 76. | NW_001092018 | ATC | 4 | 87720 | 87730 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85081352 |
| 77. | NW_001092018 | GCT | 4 | 87751 | 87762 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85081352 |
| 78. | NW_001092018 | GGA | 4 | 88963 | 88974 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 79. | NW_001092018 | AAG | 5 | 90291 | 90305 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85081356 |
| 80. | NW_001092018 | GAG | 4 | 90306 | 90317 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85081356 |
| 81. | NW_001092018 | GAG | 4 | 90387 | 90398 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85081356 |
| 82. | NW_001092018 | GAT | 4 | 91137 | 91148 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 83. | NW_001092018 | AGG | 4 | 91299 | 91310 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 84. | NW_001092018 | TTC | 4 | 91640 | 91650 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 85. | NW_001092018 | AAG | 4 | 93529 | 93540 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85081360 |
| 86. | NW_001092018 | CAC | 4 | 94050 | 94060 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 87. | NW_001092018 | AGG | 4 | 95261 | 95271 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 88. | NW_001092018 | CTG | 4 | 97315 | 97326 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85081363 |
| 89. | NW_001092018 | CGC | 4 | 100025 | 100035 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 85081363 |
| 90. | NW_001092018 | GGC | 5 | 100401 | 100415 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85081363 |
| 91. | NW_001092018 | GGT | 5 | 100410 | 100424 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85081363 |