List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092012 | AGTA | 3 | 372 | 383 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 2. | NW_001092012 | TTGA | 3 | 9189 | 9200 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 3. | NW_001092012 | TTAA | 3 | 10365 | 10376 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092012 | TTCT | 3 | 10558 | 10569 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 5. | NW_001092012 | CAAA | 3 | 16480 | 16491 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 6. | NW_001092012 | CTCC | 3 | 27479 | 27490 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | 85080459 |
| 7. | NW_001092012 | TGAA | 3 | 27981 | 27991 | 11 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 8. | NW_001092012 | CAGT | 3 | 28627 | 28638 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 9. | NW_001092012 | GACG | 3 | 30790 | 30800 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 10. | NW_001092012 | TACC | 3 | 35913 | 35924 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 11. | NW_001092012 | TAAA | 3 | 40144 | 40155 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001092012 | ACTT | 3 | 42541 | 42553 | 13 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 13. | NW_001092012 | GGCT | 3 | 49848 | 49859 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 14. | NW_001092012 | GAAA | 4 | 50545 | 50560 | 16 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 15. | NW_001092012 | AAAG | 3 | 54814 | 54824 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 16. | NW_001092012 | TTTC | 3 | 55147 | 55159 | 13 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 17. | NW_001092012 | CCCT | 3 | 55905 | 55915 | 11 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 18. | NW_001092012 | ACGT | 3 | 59078 | 59089 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 85080487 |
| 19. | NW_001092012 | TACG | 3 | 60387 | 60397 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 20. | NW_001092012 | TACC | 3 | 60982 | 60994 | 13 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 21. | NW_001092012 | GGCA | 3 | 62540 | 62550 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 22. | NW_001092012 | CCAT | 3 | 64307 | 64317 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85080491 |
| 23. | NW_001092012 | GGTA | 3 | 64745 | 64756 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 85080491 |
| 24. | NW_001092012 | TGCG | 3 | 67092 | 67102 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 25. | NW_001092012 | TACC | 4 | 67329 | 67344 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 26. | NW_001092012 | AGGG | 3 | 68920 | 68930 | 11 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 27. | NW_001092012 | CCTG | 3 | 69766 | 69776 | 11 | 0.00% | 25.00% | 25.00% | 50.00% | 85080495 |
| 28. | NW_001092012 | AGGA | 3 | 71406 | 71418 | 13 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 29. | NW_001092012 | CTTC | 3 | 71615 | 71626 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 30. | NW_001092012 | AAGA | 3 | 72103 | 72113 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 31. | NW_001092012 | TCGC | 3 | 73765 | 73776 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 32. | NW_001092012 | CCAG | 3 | 77226 | 77238 | 13 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 33. | NW_001092012 | TCCA | 4 | 79086 | 79101 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 34. | NW_001092012 | GCAG | 3 | 79654 | 79665 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | 85080503 |
| 35. | NW_001092012 | GGGC | 3 | 80469 | 80480 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 36. | NW_001092012 | ATAA | 3 | 82556 | 82567 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 37. | NW_001092012 | GATC | 3 | 83538 | 83549 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 38. | NW_001092012 | AGCT | 3 | 85496 | 85506 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |