List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092004 | TATT | 3 | 828 | 842 | 15 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092004 | GGGA | 3 | 3928 | 3939 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 85079369 |
| 3. | NW_001092004 | AAGG | 3 | 6324 | 6335 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | 85079369 |
| 4. | NW_001092004 | CTCC | 4 | 7339 | 7354 | 16 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 5. | NW_001092004 | CAGA | 6 | 9685 | 9708 | 24 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 6. | NW_001092004 | CCGT | 3 | 9896 | 9907 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 7. | NW_001092004 | AACT | 3 | 9994 | 10005 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 8. | NW_001092004 | CTAC | 3 | 10248 | 10259 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 9. | NW_001092004 | AAGA | 3 | 13440 | 13451 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 10. | NW_001092004 | TTCT | 3 | 13734 | 13744 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 11. | NW_001092004 | CTAC | 3 | 17985 | 17996 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 12. | NW_001092004 | CCAA | 13 | 19659 | 19709 | 51 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 13. | NW_001092004 | AACC | 3 | 19728 | 19739 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 14. | NW_001092004 | CAGC | 3 | 23418 | 23428 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 15. | NW_001092004 | ACAG | 3 | 23987 | 23998 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 16. | NW_001092004 | TTTG | 3 | 32122 | 32133 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 17. | NW_001092004 | CTTG | 3 | 35413 | 35423 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 18. | NW_001092004 | ACCT | 3 | 40931 | 40941 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 19. | NW_001092004 | CTTT | 3 | 42205 | 42215 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | 85079414 |
| 20. | NW_001092004 | CATG | 3 | 42416 | 42426 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 21. | NW_001092004 | AAAC | 3 | 45715 | 45726 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 22. | NW_001092004 | CGAG | 3 | 46401 | 46413 | 13 | 25.00% | 0.00% | 50.00% | 25.00% | 85079423 |
| 23. | NW_001092004 | GTTG | 3 | 48503 | 48514 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 24. | NW_001092004 | GCCG | 3 | 48569 | 48580 | 12 | 0.00% | 0.00% | 50.00% | 50.00% | Non-Coding |
| 25. | NW_001092004 | TGCC | 7 | 49840 | 49867 | 28 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 26. | NW_001092004 | CTAC | 3 | 50384 | 50395 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 27. | NW_001092004 | CTAC | 3 | 50457 | 50468 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 28. | NW_001092004 | AGAA | 3 | 51002 | 51013 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 29. | NW_001092004 | TCCT | 9 | 51376 | 51411 | 36 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 30. | NW_001092004 | CTAC | 4 | 51422 | 51436 | 15 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 31. | NW_001092004 | ACCC | 4 | 51693 | 51708 | 16 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 32. | NW_001092004 | CGCT | 3 | 53717 | 53728 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | 85079428 |
| 33. | NW_001092004 | AAAC | 3 | 56548 | 56558 | 11 | 75.00% | 0.00% | 0.00% | 25.00% | 85079432 |
| 34. | NW_001092004 | TCTG | 3 | 57075 | 57085 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | 85079432 |
| 35. | NW_001092004 | ACTT | 3 | 62278 | 62289 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 36. | NW_001092004 | GAAA | 3 | 63617 | 63628 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 85079439 |
| 37. | NW_001092004 | AGGG | 3 | 63837 | 63849 | 13 | 25.00% | 0.00% | 75.00% | 0.00% | 85079439 |
| 38. | NW_001092004 | CAAA | 3 | 67991 | 68001 | 11 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 39. | NW_001092004 | AGAA | 3 | 68178 | 68189 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 40. | NW_001092004 | AGCT | 3 | 68203 | 68214 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 41. | NW_001092004 | ATCA | 4 | 68451 | 68465 | 15 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 42. | NW_001092004 | TCCG | 5 | 68566 | 68585 | 20 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 43. | NW_001092004 | TCCA | 3 | 70576 | 70586 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85079446 |