List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001091979 | ATC | 4 | 165 | 176 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 2. | NW_001091979 | GGA | 4 | 1888 | 1898 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 3. | NW_001091979 | CAT | 4 | 2557 | 2567 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 4. | NW_001091979 | TCT | 4 | 4008 | 4020 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 5. | NW_001091979 | AGA | 4 | 4615 | 4626 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 6. | NW_001091979 | CAC | 8 | 4943 | 4966 | 24 | 33.33% | 0.00% | 0.00% | 66.67% | 85076596 |
| 7. | NW_001091979 | CCA | 4 | 5188 | 5199 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85076596 |
| 8. | NW_001091979 | GCC | 6 | 5202 | 5219 | 18 | 0.00% | 0.00% | 33.33% | 66.67% | 85076596 |
| 9. | NW_001091979 | GTG | 4 | 5373 | 5383 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | 85076596 |
| 10. | NW_001091979 | TGT | 5 | 5572 | 5586 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85076596 |
| 11. | NW_001091979 | GTT | 5 | 5678 | 5692 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85076596 |
| 12. | NW_001091979 | CTT | 4 | 5835 | 5846 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85076596 |
| 13. | NW_001091979 | CTT | 4 | 6030 | 6041 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85076596 |
| 14. | NW_001091979 | TGC | 4 | 7955 | 7965 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85076596 |
| 15. | NW_001091979 | TTG | 4 | 7996 | 8007 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85076596 |
| 16. | NW_001091979 | TGT | 6 | 8327 | 8344 | 18 | 0.00% | 66.67% | 33.33% | 0.00% | 85076596 |
| 17. | NW_001091979 | GAG | 4 | 8956 | 8967 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 18. | NW_001091979 | AGA | 4 | 11308 | 11319 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85076601 |
| 19. | NW_001091979 | CTT | 4 | 11672 | 11684 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 20. | NW_001091979 | TCA | 4 | 13608 | 13618 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 21. | NW_001091979 | CGA | 4 | 14916 | 14927 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 22. | NW_001091979 | CTT | 4 | 15163 | 15174 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85076604 |
| 23. | NW_001091979 | TCT | 4 | 15263 | 15275 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | 85076604 |
| 24. | NW_001091979 | CTT | 4 | 15742 | 15753 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85076604 |
| 25. | NW_001091979 | CTT | 6 | 15973 | 15990 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | 85076604 |
| 26. | NW_001091979 | GTC | 4 | 16009 | 16020 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85076604 |
| 27. | NW_001091979 | CCT | 4 | 16629 | 16640 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85076604 |
| 28. | NW_001091979 | CGT | 4 | 16659 | 16670 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85076604 |
| 29. | NW_001091979 | GTC | 4 | 18110 | 18122 | 13 | 0.00% | 33.33% | 33.33% | 33.33% | 85076611 |
| 30. | NW_001091979 | GAG | 4 | 18591 | 18601 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85076611 |
| 31. | NW_001091979 | ACC | 4 | 19810 | 19820 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 32. | NW_001091979 | GCA | 10 | 19866 | 19895 | 30 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 33. | NW_001091979 | AGC | 7 | 20747 | 20768 | 22 | 33.33% | 0.00% | 33.33% | 33.33% | 85076615 |
| 34. | NW_001091979 | CAG | 4 | 22795 | 22809 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85076615 |
| 35. | NW_001091979 | CAG | 5 | 23050 | 23064 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85076615 |
| 36. | NW_001091979 | TCT | 4 | 23366 | 23377 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85076615 |
| 37. | NW_001091979 | GGC | 5 | 23606 | 23620 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85076615 |
| 38. | NW_001091979 | GTT | 4 | 24265 | 24276 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 39. | NW_001091979 | GTT | 6 | 24569 | 24587 | 19 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 40. | NW_001091979 | GAA | 4 | 30132 | 30143 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85076623 |
| 41. | NW_001091979 | CTC | 7 | 31851 | 31871 | 21 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 42. | NW_001091979 | ATC | 5 | 31866 | 31880 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 43. | NW_001091979 | CCG | 4 | 32280 | 32291 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85076626 |
| 44. | NW_001091979 | AAG | 4 | 34399 | 34410 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85076626 |
| 45. | NW_001091979 | GCA | 6 | 34441 | 34458 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | 85076626 |
| 46. | NW_001091979 | CAG | 4 | 34526 | 34537 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85076626 |