List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001091974 | ATG | 4 | 477 | 488 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85076286 |
| 2. | NW_001091974 | TTG | 4 | 1533 | 1544 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85076286 |
| 3. | NW_001091974 | CGT | 5 | 2328 | 2342 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 4. | NW_001091974 | CAG | 4 | 2453 | 2464 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 5. | NW_001091974 | ACC | 4 | 2815 | 2825 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 6. | NW_001091974 | TCA | 6 | 5449 | 5465 | 17 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 7. | NW_001091974 | TCT | 11 | 5760 | 5792 | 33 | 0.00% | 66.67% | 0.00% | 33.33% | 85076323 |
| 8. | NW_001091974 | CGT | 4 | 7250 | 7261 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85076323 |
| 9. | NW_001091974 | TCC | 5 | 7444 | 7458 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85076323 |
| 10. | NW_001091974 | ACA | 4 | 10205 | 10215 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 11. | NW_001091974 | ACA | 4 | 12171 | 12182 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85076327 |
| 12. | NW_001091974 | GAA | 4 | 13273 | 13284 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 13. | NW_001091974 | ACA | 4 | 13379 | 13390 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 14. | NW_001091974 | TCA | 4 | 14078 | 14088 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 15. | NW_001091974 | GAG | 5 | 15400 | 15414 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85076332 |
| 16. | NW_001091974 | TCT | 4 | 16236 | 16246 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 17. | NW_001091974 | CAA | 4 | 16322 | 16334 | 13 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 18. | NW_001091974 | GGT | 4 | 17129 | 17140 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85076337 |
| 19. | NW_001091974 | CCT | 4 | 17438 | 17449 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85076337 |
| 20. | NW_001091974 | TCG | 4 | 18397 | 18408 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85076337 |
| 21. | NW_001091974 | TCC | 4 | 19313 | 19324 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 22. | NW_001091974 | GGT | 4 | 19611 | 19621 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 23. | NW_001091974 | CAA | 4 | 22599 | 22609 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 24. | NW_001091974 | ACA | 4 | 23579 | 23591 | 13 | 66.67% | 0.00% | 0.00% | 33.33% | 85076346 |
| 25. | NW_001091974 | CGA | 4 | 24369 | 24379 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85076346 |
| 26. | NW_001091974 | AAG | 4 | 24406 | 24417 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85076346 |
| 27. | NW_001091974 | GTG | 4 | 24791 | 24802 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85076346 |
| 28. | NW_001091974 | CAG | 15 | 25318 | 25362 | 45 | 33.33% | 0.00% | 33.33% | 33.33% | 85076346 |
| 29. | NW_001091974 | ACG | 6 | 29057 | 29074 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 30. | NW_001091974 | TGC | 4 | 30193 | 30204 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85076351 |
| 31. | NW_001091974 | CTT | 4 | 31448 | 31458 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 32. | NW_001091974 | CTC | 7 | 32641 | 32661 | 21 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |