List of
Imperfect Tri
-nucleotide repeats in Aspergillus niger CBS 513.88
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NT_166537 | GAC | 4 | 144 | 154 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 145256007 |
| 2. | NT_166537 | TAA | 4 | 2012 | 2024 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 3. | NT_166537 | CTA | 4 | 8413 | 8424 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 317037800 |
| 4. | NT_166537 | GCC | 4 | 9440 | 9451 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 317037800 |
| 5. | NT_166537 | TAG | 4 | 9809 | 9819 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 317037800 |
| 6. | NT_166537 | AGT | 4 | 13013 | 13023 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 317037802 |
| 7. | NT_166537 | CAT | 4 | 15089 | 15100 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 317037802 |
| 8. | NT_166537 | ACT | 4 | 16681 | 16692 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 9. | NT_166537 | CTC | 4 | 17759 | 17770 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 317037804 |
| 10. | NT_166537 | CTC | 5 | 17933 | 17947 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 317037804 |
| 11. | NT_166537 | AGA | 4 | 23127 | 23137 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 12. | NT_166537 | CCG | 4 | 27838 | 27849 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 317037809 |
| 13. | NT_166537 | CGA | 4 | 29648 | 29658 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 317037809 |
| 14. | NT_166537 | CTC | 4 | 30128 | 30140 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | 317037809 |
| 15. | NT_166537 | TAA | 5 | 32063 | 32078 | 16 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 16. | NT_166537 | ATA | 4 | 32249 | 32261 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 17. | NT_166537 | TAT | 4 | 32643 | 32654 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 18. | NT_166537 | CAC | 4 | 35188 | 35199 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 317037813 |
| 19. | NT_166537 | GGT | 5 | 37727 | 37741 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 20. | NT_166537 | GTA | 4 | 38495 | 38505 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 21. | NT_166537 | AGC | 4 | 39303 | 39313 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 145256060 |
| 22. | NT_166537 | GCA | 4 | 50164 | 50174 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 317037822 |
| 23. | NT_166537 | CTG | 4 | 51950 | 51961 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 317037824 |
| 24. | NT_166537 | CTC | 5 | 53585 | 53599 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 317037824 |
| 25. | NT_166537 | TTC | 4 | 59647 | 59658 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 317037826 |
| 26. | NT_166537 | GAC | 4 | 68662 | 68673 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 317037785 |
| 27. | NT_166537 | AGA | 4 | 69142 | 69153 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 28. | NT_166537 | AGG | 4 | 70470 | 70480 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 29. | NT_166537 | GGA | 4 | 72315 | 72325 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 145256106 |
| 30. | NT_166537 | GCG | 4 | 73686 | 73697 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 145256110 |
| 31. | NT_166537 | GAG | 4 | 75664 | 75674 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 317037830 |
| 32. | NT_166537 | AGA | 4 | 77852 | 77863 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 33. | NT_166537 | ACG | 4 | 82437 | 82448 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 317037789 |
| 34. | NT_166537 | GAA | 5 | 82916 | 82929 | 14 | 66.67% | 0.00% | 33.33% | 0.00% | 317037789 |
| 35. | NT_166537 | GTT | 4 | 83979 | 83990 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 36. | NT_166537 | ACT | 5 | 85431 | 85446 | 16 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 37. | NT_166537 | CTT | 4 | 85681 | 85691 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 38. | NT_166537 | ACC | 4 | 85875 | 85886 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 39. | NT_166537 | CTC | 4 | 85911 | 85922 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 40. | NT_166537 | CAT | 4 | 86228 | 86239 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 317037832 |
| 41. | NT_166537 | CTG | 7 | 86464 | 86484 | 21 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 42. | NT_166537 | CAG | 4 | 86548 | 86559 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 43. | NT_166537 | GTA | 4 | 87405 | 87416 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 44. | NT_166537 | TAC | 4 | 87657 | 87667 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 45. | NT_166537 | CAG | 4 | 88022 | 88033 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 145256128 |
| 46. | NT_166537 | GCT | 4 | 88083 | 88093 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 145256128 |
| 47. | NT_166537 | CAT | 4 | 88094 | 88105 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 145256128 |
| 48. | NT_166537 | TCG | 4 | 88105 | 88116 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 145256128 |
| 49. | NT_166537 | TCA | 5 | 88129 | 88143 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | 145256128 |
| 50. | NT_166537 | GAG | 4 | 88207 | 88218 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 145256128 |
| 51. | NT_166537 | CAC | 4 | 90010 | 90022 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | 145256128 |
| 52. | NT_166537 | GGA | 5 | 90233 | 90247 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 145256128 |
| 53. | NT_166537 | CAG | 4 | 92513 | 92523 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 145256130 |
| 54. | NT_166537 | TTG | 4 | 92986 | 92997 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 145256130 |
| 55. | NT_166537 | TCA | 4 | 93771 | 93781 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 145256130 |
| 56. | NT_166537 | CGC | 4 | 94968 | 94980 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 57. | NT_166537 | ATC | 4 | 99449 | 99460 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 58. | NT_166537 | GGA | 4 | 100278 | 100289 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 317037835 |
| 59. | NT_166537 | CTG | 4 | 105876 | 105887 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 60. | NT_166537 | CAC | 4 | 106093 | 106104 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 61. | NT_166537 | CTT | 5 | 106134 | 106148 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 62. | NT_166537 | CGT | 5 | 106146 | 106160 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 63. | NT_166537 | TTC | 4 | 106198 | 106209 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 64. | NT_166537 | TCT | 4 | 106256 | 106267 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 65. | NT_166537 | CCA | 4 | 106315 | 106326 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 66. | NT_166537 | CTC | 4 | 107139 | 107151 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | 317037837 |
| 67. | NT_166537 | TGA | 4 | 108280 | 108290 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 317037839 |
| 68. | NT_166537 | ACA | 4 | 108909 | 108920 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 317037839 |
| 69. | NT_166537 | TGT | 4 | 111365 | 111375 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 70. | NT_166537 | TCT | 4 | 111399 | 111409 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 71. | NT_166537 | ATG | 4 | 111497 | 111508 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 72. | NT_166537 | AGT | 7 | 111946 | 111966 | 21 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 73. | NT_166537 | TAC | 5 | 112138 | 112153 | 16 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 74. | NT_166537 | GGC | 4 | 113377 | 113388 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 317037841 |
| 75. | NT_166537 | GGT | 4 | 114310 | 114322 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | 317037841 |
| 76. | NT_166537 | GGA | 5 | 115375 | 115390 | 16 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 77. | NT_166537 | CTG | 8 | 115835 | 115857 | 23 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 78. | NT_166537 | TCT | 5 | 116038 | 116052 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 79. | NT_166537 | CCT | 5 | 116392 | 116406 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 80. | NT_166537 | GAG | 4 | 117678 | 117689 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 317037843 |
| 81. | NT_166537 | TGC | 4 | 118111 | 118122 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 317037843 |
| 82. | NT_166537 | GAT | 4 | 118424 | 118434 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 317037843 |
| 83. | NT_166537 | TCC | 4 | 118837 | 118848 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 317037845 |
| 84. | NT_166537 | CGA | 5 | 119439 | 119453 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 317037845 |
| 85. | NT_166537 | GTG | 5 | 119581 | 119595 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 317037845 |
| 86. | NT_166537 | TGG | 4 | 119852 | 119863 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 317037845 |
| 87. | NT_166537 | AGG | 4 | 119939 | 119949 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 88. | NT_166537 | GAG | 8 | 124114 | 124137 | 24 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 89. | NT_166537 | GTG | 9 | 124132 | 124158 | 27 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 90. | NT_166537 | AGC | 4 | 124259 | 124270 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 91. | NT_166537 | AGG | 4 | 129444 | 129455 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 145256170 |
| 92. | NT_166537 | TGC | 4 | 129766 | 129777 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 145256170 |
| 93. | NT_166537 | CTA | 4 | 130625 | 130636 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 94. | NT_166537 | CAC | 5 | 130664 | 130679 | 16 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 95. | NT_166537 | ACT | 4 | 130724 | 130735 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 96. | NT_166537 | GAC | 4 | 134744 | 134756 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 97. | NT_166537 | CGT | 4 | 136802 | 136812 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 98. | NT_166537 | GCC | 4 | 137238 | 137249 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 317037849 |
| 99. | NT_166537 | GAG | 5 | 138806 | 138820 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 317037849 |
| 100. | NT_166537 | CGC | 4 | 139284 | 139295 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 317037849 |
| 101. | NT_166537 | TGA | 5 | 139530 | 139543 | 14 | 33.33% | 33.33% | 33.33% | 0.00% | 317037849 |
| 102. | NT_166537 | CGA | 4 | 143374 | 143385 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 145256185 |
| 103. | NT_166537 | CAC | 4 | 143532 | 143543 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 145256185 |
| 104. | NT_166537 | TGG | 4 | 144087 | 144098 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 145256185 |
| 105. | NT_166537 | GAC | 4 | 149238 | 149248 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 317037853 |
| 106. | NT_166537 | CCT | 4 | 152590 | 152601 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 317037855 |
| 107. | NT_166537 | TGA | 4 | 154097 | 154108 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 108. | NT_166537 | CCG | 4 | 156202 | 156212 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 317037857 |
| 109. | NT_166537 | TGC | 4 | 162886 | 162897 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 317037859 |
| 110. | NT_166537 | AGA | 4 | 166378 | 166388 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 317037859 |
| 111. | NT_166537 | CGG | 4 | 171488 | 171499 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 145256217 |
| 112. | NT_166537 | AGT | 4 | 173482 | 173492 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 113. | NT_166537 | TGT | 4 | 177164 | 177175 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 145256225 |
| 114. | NT_166537 | CAT | 4 | 181342 | 181353 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 145256228 |
| 115. | NT_166537 | ATC | 4 | 181550 | 181561 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 145256228 |
| 116. | NT_166537 | CAT | 4 | 199941 | 199952 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 117. | NT_166537 | GTG | 4 | 203854 | 203865 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 317037869 |
| 118. | NT_166537 | CCT | 4 | 204138 | 204151 | 14 | 0.00% | 33.33% | 0.00% | 66.67% | 317037869 |
| 119. | NT_166537 | AGC | 4 | 205497 | 205509 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | 145256244 |
| 120. | NT_166537 | TAG | 4 | 207516 | 207528 | 13 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 121. | NT_166537 | GCA | 4 | 209272 | 209283 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 122. | NT_166537 | TCT | 4 | 210924 | 210936 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 123. | NT_166537 | GAG | 4 | 212851 | 212861 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 124. | NT_166537 | TGA | 4 | 212927 | 212937 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 125. | NT_166537 | TGA | 4 | 214170 | 214180 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 126. | NT_166537 | GCA | 4 | 214259 | 214270 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 127. | NT_166537 | TGC | 4 | 214309 | 214321 | 13 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 128. | NT_166537 | AGA | 4 | 215309 | 215320 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 129. | NT_166537 | TGC | 4 | 215514 | 215525 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 130. | NT_166537 | GTA | 5 | 217532 | 217547 | 16 | 33.33% | 33.33% | 33.33% | 0.00% | 145256253 |
| 131. | NT_166537 | GGA | 4 | 219465 | 219475 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 145256256 |
| 132. | NT_166537 | TGG | 4 | 221239 | 221250 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 317037873 |
| 133. | NT_166537 | TAC | 4 | 223402 | 223413 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 145256261 |
| 134. | NT_166537 | CTC | 4 | 227613 | 227624 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 135. | NT_166537 | AGA | 5 | 228314 | 228327 | 14 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 136. | NT_166537 | CAG | 5 | 230275 | 230288 | 14 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 137. | NT_166537 | CAG | 4 | 230479 | 230489 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 138. | NT_166537 | GCA | 7 | 239622 | 239642 | 21 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 139. | NT_166537 | GGT | 4 | 244001 | 244012 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 145256279 |
| 140. | NT_166537 | CTT | 5 | 245866 | 245880 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 141. | NT_166537 | ATA | 4 | 249460 | 249472 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 142. | NT_166537 | TGT | 4 | 250460 | 250471 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 143. | NT_166537 | TGC | 4 | 252792 | 252803 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 144. | NT_166537 | ACT | 4 | 253551 | 253562 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 145. | NT_166537 | TGA | 4 | 255761 | 255771 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 146. | NT_166537 | TAC | 4 | 259900 | 259911 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 147. | NT_166537 | ACC | 7 | 260496 | 260516 | 21 | 33.33% | 0.00% | 0.00% | 66.67% | 145256295 |