List of
Imperfect Hexa
-nucleotide repeats in Aspergillus niger CBS 513.88
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NT_166528 | CAGCCG | 3 | 2222 | 2239 | 18 | 16.67% | 0.00% | 33.33% | 50.00% | 145247789 |
| 2. | NT_166528 | AAAGAA | 3 | 35780 | 35797 | 18 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 3. | NT_166528 | CCTTCT | 3 | 40159 | 40182 | 24 | 0.00% | 50.00% | 0.00% | 50.00% | 145247813 |
| 4. | NT_166528 | AAAATA | 4 | 46139 | 46163 | 25 | 83.33% | 16.67% | 0.00% | 0.00% | Non-Coding |
| 5. | NT_166528 | TCTTTT | 4 | 59876 | 59899 | 24 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 6. | NT_166528 | TCAGAG | 3 | 68070 | 68087 | 18 | 33.33% | 16.67% | 33.33% | 16.67% | Non-Coding |
| 7. | NT_166528 | TCCCTC | 3 | 74079 | 74096 | 18 | 0.00% | 33.33% | 0.00% | 66.67% | 145247839 |
| 8. | NT_166528 | CAGCTC | 4 | 79391 | 79414 | 24 | 16.67% | 16.67% | 16.67% | 50.00% | 317034193 |
| 9. | NT_166528 | AAGACC | 3 | 92696 | 92713 | 18 | 50.00% | 0.00% | 16.67% | 33.33% | Non-Coding |
| 10. | NT_166528 | AGAACC | 3 | 109453 | 109470 | 18 | 50.00% | 0.00% | 16.67% | 33.33% | 145247869 |
| 11. | NT_166528 | TTTCCT | 3 | 109744 | 109761 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 12. | NT_166528 | TCCGCC | 3 | 115597 | 115614 | 18 | 0.00% | 16.67% | 16.67% | 66.67% | 145247875 |
| 13. | NT_166528 | CTTTTC | 3 | 124710 | 124727 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 14. | NT_166528 | GTGGTT | 4 | 128834 | 128857 | 24 | 0.00% | 50.00% | 50.00% | 0.00% | 317034353 |
| 15. | NT_166528 | GTGATT | 3 | 129011 | 129028 | 18 | 16.67% | 50.00% | 33.33% | 0.00% | 317034353 |
| 16. | NT_166528 | GTAGTT | 3 | 129023 | 129040 | 18 | 16.67% | 50.00% | 33.33% | 0.00% | 317034353 |
| 17. | NT_166528 | TCTATA | 3 | 160132 | 160150 | 19 | 33.33% | 50.00% | 0.00% | 16.67% | Non-Coding |
| 18. | NT_166528 | GGGAAG | 3 | 162643 | 162660 | 18 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 19. | NT_166528 | CTCGGA | 3 | 169719 | 169736 | 18 | 16.67% | 16.67% | 33.33% | 33.33% | 317034360 |
| 20. | NT_166528 | TCCCCT | 3 | 176220 | 176237 | 18 | 0.00% | 33.33% | 0.00% | 66.67% | 145247935 |
| 21. | NT_166528 | CCGCCC | 3 | 176735 | 176752 | 18 | 0.00% | 0.00% | 16.67% | 83.33% | 145247935 |
| 22. | NT_166528 | ATTGTT | 4 | 206863 | 206886 | 24 | 16.67% | 66.67% | 16.67% | 0.00% | Non-Coding |
| 23. | NT_166528 | CTGCTT | 4 | 206902 | 206925 | 24 | 0.00% | 50.00% | 16.67% | 33.33% | Non-Coding |
| 24. | NT_166528 | ACGATG | 4 | 231716 | 231745 | 30 | 33.33% | 16.67% | 33.33% | 16.67% | 145247979 |
| 25. | NT_166528 | AAATAA | 3 | 241519 | 241537 | 19 | 83.33% | 16.67% | 0.00% | 0.00% | Non-Coding |
| 26. | NT_166528 | AAGATG | 3 | 261582 | 261599 | 18 | 50.00% | 16.67% | 33.33% | 0.00% | Non-Coding |
| 27. | NT_166528 | GTGTTG | 3 | 267433 | 267450 | 18 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 28. | NT_166528 | TGTCTG | 4 | 267602 | 267625 | 24 | 0.00% | 50.00% | 33.33% | 16.67% | Non-Coding |
| 29. | NT_166528 | CCTCTG | 4 | 272833 | 272856 | 24 | 0.00% | 33.33% | 16.67% | 50.00% | 317034259 |
| 30. | NT_166528 | CGTGAG | 3 | 275974 | 275992 | 19 | 16.67% | 16.67% | 50.00% | 16.67% | 317034369 |
| 31. | NT_166528 | CGTTTG | 3 | 312154 | 312171 | 18 | 0.00% | 50.00% | 33.33% | 16.67% | 317034379 |
| 32. | NT_166528 | TATGAT | 3 | 325416 | 325433 | 18 | 33.33% | 50.00% | 16.67% | 0.00% | 317034270 |
| 33. | NT_166528 | TCTGGA | 3 | 348918 | 348935 | 18 | 16.67% | 33.33% | 33.33% | 16.67% | Non-Coding |
| 34. | NT_166528 | GAGAAA | 3 | 365489 | 365505 | 17 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 35. | NT_166528 | CATTTG | 3 | 376439 | 376457 | 19 | 16.67% | 50.00% | 16.67% | 16.67% | Non-Coding |
| 36. | NT_166528 | AGAGGA | 4 | 472089 | 472112 | 24 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 37. | NT_166528 | GGAGAG | 3 | 476872 | 476889 | 18 | 33.33% | 0.00% | 66.67% | 0.00% | 145248167 |
| 38. | NT_166528 | CGGGGG | 3 | 491657 | 491674 | 18 | 0.00% | 0.00% | 83.33% | 16.67% | Non-Coding |
| 39. | NT_166528 | CCGCGA | 3 | 516997 | 517015 | 19 | 16.67% | 0.00% | 33.33% | 50.00% | 317034435 |
| 40. | NT_166528 | GCAGGA | 4 | 562133 | 562156 | 24 | 33.33% | 0.00% | 50.00% | 16.67% | Non-Coding |
| 41. | NT_166528 | AGAGAA | 3 | 566585 | 566603 | 19 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 42. | NT_166528 | AAAGAA | 3 | 577868 | 577886 | 19 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 43. | NT_166528 | GTTCTT | 3 | 592788 | 592805 | 18 | 0.00% | 66.67% | 16.67% | 16.67% | Non-Coding |
| 44. | NT_166528 | CTCGTC | 4 | 604484 | 604507 | 24 | 0.00% | 33.33% | 16.67% | 50.00% | 145248277 |
| 45. | NT_166528 | TCCCAG | 4 | 632426 | 632449 | 24 | 16.67% | 16.67% | 16.67% | 50.00% | 145248309 |
| 46. | NT_166528 | GTCCTC | 3 | 694712 | 694729 | 18 | 0.00% | 33.33% | 16.67% | 50.00% | 145248379 |
| 47. | NT_166528 | GATGGG | 3 | 716714 | 716731 | 18 | 16.67% | 16.67% | 66.67% | 0.00% | 145248395 |
| 48. | NT_166528 | GATGGG | 3 | 722816 | 722833 | 18 | 16.67% | 16.67% | 66.67% | 0.00% | Non-Coding |
| 49. | NT_166528 | AAATAA | 4 | 741852 | 741875 | 24 | 83.33% | 16.67% | 0.00% | 0.00% | Non-Coding |
| 50. | NT_166528 | GCGACG | 3 | 832323 | 832339 | 17 | 16.67% | 0.00% | 50.00% | 33.33% | Non-Coding |