List of
Perfect Tetra
-nucleotide repeats in Aspergillus niger CBS 513.88
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NT_166525 | CAGC | 3 | 83645 | 83656 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 145241446 |
| 2. | NT_166525 | TGGA | 3 | 109270 | 109281 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 3. | NT_166525 | CATC | 3 | 139062 | 139073 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 4. | NT_166525 | TATT | 3 | 154944 | 154955 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 5. | NT_166525 | GCTA | 3 | 155346 | 155357 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 6. | NT_166525 | CGAC | 3 | 201103 | 201114 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 7. | NT_166525 | TAGT | 3 | 248981 | 248992 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 8. | NT_166525 | TGTT | 3 | 334420 | 334431 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 9. | NT_166525 | CAAT | 4 | 345189 | 345204 | 16 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 10. | NT_166525 | TGGA | 3 | 500884 | 500895 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 317031454 |
| 11. | NT_166525 | GTCT | 3 | 506307 | 506318 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 12. | NT_166525 | CTTT | 3 | 507161 | 507172 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 13. | NT_166525 | TAGA | 3 | 527558 | 527569 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 14. | NT_166525 | ACAT | 3 | 537140 | 537151 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 15. | NT_166525 | AGCT | 4 | 539750 | 539765 | 16 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 16. | NT_166525 | GGGT | 3 | 571865 | 571876 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 17. | NT_166525 | AAAG | 3 | 583938 | 583949 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 145241878 |
| 18. | NT_166525 | GACT | 3 | 644729 | 644740 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 19. | NT_166525 | CATC | 3 | 648068 | 648079 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 20. | NT_166525 | GGTT | 3 | 651045 | 651056 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 21. | NT_166525 | GCAC | 3 | 656408 | 656419 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 22. | NT_166525 | TTCT | 26 | 670848 | 670951 | 104 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 23. | NT_166525 | TTGC | 3 | 673279 | 673290 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 24. | NT_166525 | AAAG | 3 | 686383 | 686394 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 25. | NT_166525 | TGTA | 3 | 687891 | 687902 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 26. | NT_166525 | GAAG | 3 | 688685 | 688696 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 27. | NT_166525 | AGAT | 4 | 698932 | 698947 | 16 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 28. | NT_166525 | TATC | 3 | 709138 | 709149 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 29. | NT_166525 | TTAG | 3 | 714538 | 714549 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 30. | NT_166525 | ATCC | 3 | 733067 | 733078 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 31. | NT_166525 | GCTG | 3 | 738190 | 738201 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 32. | NT_166525 | ACTG | 3 | 740300 | 740311 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 33. | NT_166525 | CAGA | 5 | 774467 | 774486 | 20 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 34. | NT_166525 | TACC | 3 | 783091 | 783102 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 35. | NT_166525 | CTGG | 4 | 783368 | 783383 | 16 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 36. | NT_166525 | TGCC | 4 | 783547 | 783562 | 16 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 37. | NT_166525 | AGTG | 4 | 863025 | 863040 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 38. | NT_166525 | CTAG | 4 | 892074 | 892089 | 16 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 39. | NT_166525 | GTAG | 3 | 903429 | 903440 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 317031514 |
| 40. | NT_166525 | TTCC | 3 | 915115 | 915126 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 41. | NT_166525 | TTTC | 3 | 915713 | 915724 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 42. | NT_166525 | ATGG | 3 | 924281 | 924292 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 43. | NT_166525 | TGGC | 3 | 931337 | 931348 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | 145242162 |
| 44. | NT_166525 | AGGG | 3 | 943976 | 943987 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 145242176 |
| 45. | NT_166525 | AAGG | 7 | 953889 | 953916 | 28 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 46. | NT_166525 | CTCC | 3 | 976060 | 976071 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 47. | NT_166525 | GTTT | 3 | 976590 | 976601 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | 317031976 |
| 48. | NT_166525 | CTTG | 3 | 990069 | 990080 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 49. | NT_166525 | AGTA | 3 | 995076 | 995087 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 50. | NT_166525 | GCTG | 3 | 997262 | 997273 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 51. | NT_166525 | GTAA | 3 | 1001890 | 1001901 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 52. | NT_166525 | AGTA | 3 | 1001920 | 1001931 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 53. | NT_166525 | TAAC | 3 | 1002257 | 1002268 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 54. | NT_166525 | ATAA | 3 | 1002558 | 1002569 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 55. | NT_166525 | TCTA | 3 | 1003590 | 1003601 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 56. | NT_166525 | TCAG | 5 | 1017666 | 1017685 | 20 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 57. | NT_166525 | GAAA | 3 | 1017874 | 1017885 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 58. | NT_166525 | TGAT | 3 | 1026305 | 1026316 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 59. | NT_166525 | ACTG | 3 | 1026810 | 1026821 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 60. | NT_166525 | GAGT | 4 | 1039394 | 1039409 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 61. | NT_166525 | ATAG | 3 | 1044630 | 1044641 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 62. | NT_166525 | GACT | 3 | 1045760 | 1045771 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 63. | NT_166525 | GCCT | 3 | 1045780 | 1045791 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 64. | NT_166525 | TACC | 3 | 1050269 | 1050280 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 65. | NT_166525 | ATGG | 3 | 1053413 | 1053424 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 66. | NT_166525 | AGCC | 3 | 1055886 | 1055897 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 67. | NT_166525 | CATC | 4 | 1058058 | 1058073 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 68. | NT_166525 | CCTC | 3 | 1060166 | 1060177 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 69. | NT_166525 | TAAA | 3 | 1075803 | 1075814 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 70. | NT_166525 | ACCA | 3 | 1080590 | 1080601 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 71. | NT_166525 | AGAA | 4 | 1092185 | 1092200 | 16 | 75.00% | 0.00% | 25.00% | 0.00% | 145242374 |
| 72. | NT_166525 | GTAG | 4 | 1093009 | 1093024 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 73. | NT_166525 | TCAA | 3 | 1093877 | 1093888 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 74. | NT_166525 | CAAA | 4 | 1093908 | 1093923 | 16 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 75. | NT_166525 | GAAA | 3 | 1094031 | 1094042 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 76. | NT_166525 | TGGT | 3 | 1102089 | 1102100 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | 317031559 |
| 77. | NT_166525 | TTGA | 3 | 1127555 | 1127566 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 78. | NT_166525 | TCTT | 3 | 1136989 | 1137000 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 79. | NT_166525 | GAAT | 3 | 1145889 | 1145900 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 80. | NT_166525 | ACAG | 3 | 1159305 | 1159316 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 81. | NT_166525 | CTGG | 4 | 1162220 | 1162235 | 16 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 82. | NT_166525 | CTAC | 3 | 1169745 | 1169756 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 83. | NT_166525 | AGAT | 3 | 1174982 | 1174993 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 84. | NT_166525 | TATG | 3 | 1175389 | 1175400 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 85. | NT_166525 | ATGC | 3 | 1175838 | 1175849 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 86. | NT_166525 | GCTG | 7 | 1176123 | 1176150 | 28 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 87. | NT_166525 | TGGC | 5 | 1181052 | 1181071 | 20 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 88. | NT_166525 | ACAA | 3 | 1188960 | 1188971 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 89. | NT_166525 | TATC | 3 | 1203182 | 1203193 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 90. | NT_166525 | AGGA | 3 | 1203901 | 1203912 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 91. | NT_166525 | ATCA | 3 | 1218682 | 1218693 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 92. | NT_166525 | TTTC | 3 | 1251014 | 1251025 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 93. | NT_166525 | GACA | 4 | 1251481 | 1251496 | 16 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 94. | NT_166525 | ACAT | 3 | 1277226 | 1277237 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 95. | NT_166525 | TGGC | 3 | 1280510 | 1280521 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 96. | NT_166525 | TCTT | 3 | 1281341 | 1281352 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 317031597 |
| 97. | NT_166525 | CACT | 3 | 1294529 | 1294540 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 317032043 |
| 98. | NT_166525 | GTAA | 3 | 1328832 | 1328843 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 99. | NT_166525 | GTCT | 3 | 1330720 | 1330731 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 100. | NT_166525 | CATT | 3 | 1330820 | 1330831 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 101. | NT_166525 | ATAC | 4 | 1336125 | 1336140 | 16 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 102. | NT_166525 | CTGA | 3 | 1348884 | 1348895 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 103. | NT_166525 | TCAC | 3 | 1367639 | 1367650 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 104. | NT_166525 | TATG | 3 | 1396009 | 1396020 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 105. | NT_166525 | CAAG | 4 | 1415827 | 1415842 | 16 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 106. | NT_166525 | CGGC | 3 | 1439435 | 1439446 | 12 | 0.00% | 0.00% | 50.00% | 50.00% | 317032066 |
| 107. | NT_166525 | TGCC | 3 | 1441768 | 1441779 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 108. | NT_166525 | TGTC | 4 | 1444708 | 1444723 | 16 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 109. | NT_166525 | CGGA | 3 | 1449790 | 1449801 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 110. | NT_166525 | GGAG | 3 | 1472300 | 1472311 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 111. | NT_166525 | TGAG | 4 | 1473001 | 1473016 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | 317032078 |
| 112. | NT_166525 | TACA | 4 | 1473137 | 1473152 | 16 | 50.00% | 25.00% | 0.00% | 25.00% | 317032078 |
| 113. | NT_166525 | GATG | 5 | 1473575 | 1473594 | 20 | 25.00% | 25.00% | 50.00% | 0.00% | 317032078 |
| 114. | NT_166525 | AGCT | 3 | 1473725 | 1473736 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 317032078 |
| 115. | NT_166525 | TCAG | 4 | 1473779 | 1473794 | 16 | 25.00% | 25.00% | 25.00% | 25.00% | 317032078 |
| 116. | NT_166525 | CATG | 3 | 1473996 | 1474007 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 317032078 |
| 117. | NT_166525 | GCTC | 3 | 1474039 | 1474050 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | 317032078 |
| 118. | NT_166525 | GACT | 3 | 1475103 | 1475114 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 317032078 |
| 119. | NT_166525 | TTTC | 3 | 1480354 | 1480365 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 120. | NT_166525 | GTTA | 3 | 1483847 | 1483858 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 121. | NT_166525 | AATT | 3 | 1484179 | 1484190 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 122. | NT_166525 | ATCT | 3 | 1502528 | 1502539 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 123. | NT_166525 | TCCC | 3 | 1507709 | 1507720 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 124. | NT_166525 | ATAG | 6 | 1526877 | 1526900 | 24 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 125. | NT_166525 | GACG | 3 | 1527336 | 1527347 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 126. | NT_166525 | GTAT | 3 | 1529559 | 1529570 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 127. | NT_166525 | TCTT | 3 | 1537989 | 1538000 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 128. | NT_166525 | TATT | 4 | 1538712 | 1538727 | 16 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 129. | NT_166525 | CTGG | 3 | 1553760 | 1553771 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | 145242834 |
| 130. | NT_166525 | GTAG | 3 | 1590528 | 1590539 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 131. | NT_166525 | TATG | 3 | 1593977 | 1593988 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |