List of
Imperfect Penta
-nucleotide repeats in Aspergillus niger CBS 513.88
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NT_166522 | AATAA | 3 | 14116 | 14131 | 16 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NT_166522 | TATTA | 3 | 20559 | 20573 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 3. | NT_166522 | ATTTT | 3 | 20934 | 20947 | 14 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 4. | NT_166522 | ATTCT | 3 | 21018 | 21031 | 14 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 5. | NT_166522 | AAAAT | 3 | 23485 | 23500 | 16 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 6. | NT_166522 | TAAAA | 4 | 23501 | 23519 | 19 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 7. | NT_166522 | ACTTG | 3 | 38573 | 38588 | 16 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 8. | NT_166522 | AATGG | 3 | 65003 | 65017 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | 317029080 |
| 9. | NT_166522 | TTATT | 3 | 122684 | 122698 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 10. | NT_166522 | AAAAT | 3 | 162162 | 162176 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 11. | NT_166522 | AGCAA | 3 | 188480 | 188494 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 12. | NT_166522 | TGTGG | 3 | 207972 | 207986 | 15 | 0.00% | 40.00% | 60.00% | 0.00% | Non-Coding |
| 13. | NT_166522 | ACTTG | 3 | 218768 | 218782 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 14. | NT_166522 | ATTAT | 5 | 228236 | 228259 | 24 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 15. | NT_166522 | AAATA | 3 | 228980 | 228994 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 16. | NT_166522 | CAAGG | 3 | 230372 | 230386 | 15 | 40.00% | 0.00% | 40.00% | 20.00% | 145236553 |
| 17. | NT_166522 | ACAAA | 3 | 233929 | 233943 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 18. | NT_166522 | CCTGT | 3 | 235853 | 235866 | 14 | 0.00% | 40.00% | 20.00% | 40.00% | 145236559 |
| 19. | NT_166522 | CTGGA | 3 | 245498 | 245512 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 20. | NT_166522 | CATCC | 3 | 275540 | 275554 | 15 | 20.00% | 20.00% | 0.00% | 60.00% | 317029144 |
| 21. | NT_166522 | TGCAC | 3 | 321772 | 321786 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | 145236613 |
| 22. | NT_166522 | CATGC | 6 | 323574 | 323602 | 29 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 23. | NT_166522 | AACCC | 4 | 324622 | 324640 | 19 | 40.00% | 0.00% | 0.00% | 60.00% | Non-Coding |
| 24. | NT_166522 | ATATC | 4 | 325670 | 325690 | 21 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 25. | NT_166522 | ATGGG | 3 | 330790 | 330804 | 15 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 26. | NT_166522 | TAGCA | 5 | 339722 | 339745 | 24 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 27. | NT_166522 | ATCCC | 3 | 358712 | 358726 | 15 | 20.00% | 20.00% | 0.00% | 60.00% | 317029023 |
| 28. | NT_166522 | ACATA | 3 | 386943 | 386957 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 29. | NT_166522 | ACCCC | 3 | 415158 | 415173 | 16 | 20.00% | 0.00% | 0.00% | 80.00% | 317029034 |
| 30. | NT_166522 | TACGG | 3 | 417616 | 417630 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 31. | NT_166522 | AAAAC | 3 | 436533 | 436547 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 32. | NT_166522 | GGTAT | 3 | 440489 | 440502 | 14 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 33. | NT_166522 | CTGCG | 3 | 442348 | 442361 | 14 | 0.00% | 20.00% | 40.00% | 40.00% | 145236697 |
| 34. | NT_166522 | TAGTA | 3 | 480671 | 480685 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 35. | NT_166522 | GCCAT | 3 | 481775 | 481790 | 16 | 20.00% | 20.00% | 20.00% | 40.00% | 145236733 |
| 36. | NT_166522 | AAGCA | 3 | 488734 | 488747 | 14 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 37. | NT_166522 | GAAAA | 3 | 549078 | 549092 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 38. | NT_166522 | AAGAG | 3 | 556008 | 556023 | 16 | 60.00% | 0.00% | 40.00% | 0.00% | 317029208 |
| 39. | NT_166522 | GCTTT | 3 | 592823 | 592836 | 14 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 40. | NT_166522 | AGGGA | 3 | 615086 | 615100 | 15 | 40.00% | 0.00% | 60.00% | 0.00% | Non-Coding |
| 41. | NT_166522 | TATAT | 3 | 682008 | 682022 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |