List of
Perfect Tetra
-nucleotide repeats in Aspergillus nidulans FGSC A4
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NT_107010 | AAGC | 3 | 25839 | 25850 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | 67537858 |
| 2. | NT_107010 | AGGA | 3 | 55091 | 55102 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | 67537880 |
| 3. | NT_107010 | CATC | 3 | 106899 | 106910 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 4. | NT_107010 | TTGA | 3 | 136911 | 136922 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | 67537938 |
| 5. | NT_107010 | CTCC | 3 | 167656 | 167667 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 6. | NT_107010 | GGAT | 3 | 172151 | 172162 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 7. | NT_107010 | TAGA | 3 | 228852 | 228863 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 8. | NT_107010 | AGTC | 3 | 230551 | 230562 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 9. | NT_107010 | TATT | 3 | 235198 | 235209 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 10. | NT_107010 | CGCT | 3 | 276414 | 276425 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | 67538016 |
| 11. | NT_107010 | TAGG | 3 | 344821 | 344832 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 12. | NT_107010 | CGAA | 3 | 409055 | 409066 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | 67538104 |
| 13. | NT_107010 | ACGG | 3 | 422004 | 422015 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 14. | NT_107010 | ACCT | 3 | 485609 | 485620 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 67538152 |
| 15. | NT_107010 | TACT | 3 | 547590 | 547601 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | 67538188 |
| 16. | NT_107010 | GCTA | 3 | 562270 | 562281 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 17. | NT_107010 | GCCT | 3 | 647488 | 647499 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 18. | NT_107010 | CTGA | 3 | 705435 | 705446 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 19. | NT_107010 | CCAA | 3 | 808774 | 808785 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 20. | NT_107010 | CAAT | 3 | 824095 | 824106 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 21. | NT_107010 | GAAA | 3 | 870560 | 870571 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 22. | NT_107010 | ACAT | 3 | 965296 | 965307 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 23. | NT_107010 | ATTT | 5 | 991989 | 992008 | 20 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 24. | NT_107010 | ATTT | 3 | 992018 | 992029 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 25. | NT_107010 | GCTT | 3 | 992815 | 992826 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | 67538484 |
| 26. | NT_107010 | GACA | 3 | 1019260 | 1019271 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 27. | NT_107010 | TGCA | 3 | 1019515 | 1019526 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 67538504 |
| 28. | NT_107010 | AATC | 6 | 1098711 | 1098734 | 24 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 29. | NT_107010 | AGGA | 3 | 1174223 | 1174234 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 30. | NT_107010 | TGCC | 3 | 1223792 | 1223803 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 31. | NT_107010 | TAAA | 3 | 1231510 | 1231521 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | 67538632 |
| 32. | NT_107010 | ATAA | 5 | 1322258 | 1322277 | 20 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 33. | NT_107010 | TGCG | 3 | 1322355 | 1322366 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 34. | NT_107010 | TCTT | 4 | 1352495 | 1352510 | 16 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 35. | NT_107010 | ACGC | 3 | 1377433 | 1377444 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 67538714 |
| 36. | NT_107010 | ACCA | 3 | 1468631 | 1468642 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 37. | NT_107010 | CATT | 3 | 1475379 | 1475390 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 38. | NT_107010 | CATC | 3 | 1487634 | 1487645 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 39. | NT_107010 | CCCG | 3 | 1552081 | 1552092 | 12 | 0.00% | 0.00% | 25.00% | 75.00% | 67538820 |
| 40. | NT_107010 | CTGT | 3 | 1772005 | 1772016 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | 67538948 |
| 41. | NT_107010 | GATG | 3 | 1778996 | 1779007 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 42. | NT_107010 | CTAC | 3 | 1792239 | 1792250 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 67538960 |
| 43. | NT_107010 | CAGA | 4 | 1816127 | 1816142 | 16 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 44. | NT_107010 | TACC | 3 | 1825165 | 1825176 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 45. | NT_107010 | GCTA | 3 | 1845831 | 1845842 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 46. | NT_107010 | GATG | 3 | 1850773 | 1850784 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 67538996 |
| 47. | NT_107010 | CATA | 3 | 1862243 | 1862254 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 48. | NT_107010 | CCAG | 3 | 1883642 | 1883653 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 67539014 |
| 49. | NT_107010 | GATC | 3 | 1896238 | 1896249 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 50. | NT_107010 | AAGA | 3 | 1898203 | 1898214 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 67539030 |
| 51. | NT_107010 | AGGA | 4 | 1917376 | 1917391 | 16 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 52. | NT_107010 | CAAC | 4 | 1925563 | 1925578 | 16 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 53. | NT_107010 | CGAC | 3 | 1940403 | 1940414 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 54. | NT_107010 | TGGA | 3 | 1952485 | 1952496 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 67539074 |
| 55. | NT_107010 | GAAA | 7 | 1968142 | 1968169 | 28 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 56. | NT_107010 | CTGG | 3 | 2175095 | 2175106 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | 67539232 |
| 57. | NT_107010 | CCTC | 3 | 2176884 | 2176895 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |