List of
Imperfect Hexa
-nucleotide repeats in Aspergillus nidulans FGSC A4
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NT_107008 | TGGTGA | 3 | 43668 | 43685 | 18 | 16.67% | 33.33% | 50.00% | 0.00% | 67540666 |
| 2. | NT_107008 | ATCCGC | 3 | 54653 | 54670 | 18 | 16.67% | 16.67% | 16.67% | 50.00% | 67540674 |
| 3. | NT_107008 | AGAAAA | 3 | 58124 | 58141 | 18 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 4. | NT_107008 | TGCTAC | 3 | 117263 | 117280 | 18 | 16.67% | 33.33% | 16.67% | 33.33% | Non-Coding |
| 5. | NT_107008 | CCGATG | 3 | 184707 | 184724 | 18 | 16.67% | 16.67% | 33.33% | 33.33% | Non-Coding |
| 6. | NT_107008 | CTGCCT | 3 | 187857 | 187873 | 17 | 0.00% | 33.33% | 16.67% | 50.00% | 67540772 |
| 7. | NT_107008 | CAAGCT | 3 | 203695 | 203712 | 18 | 33.33% | 16.67% | 16.67% | 33.33% | 67540786 |
| 8. | NT_107008 | TCGCAG | 3 | 209570 | 209587 | 18 | 16.67% | 16.67% | 33.33% | 33.33% | 67540790 |
| 9. | NT_107008 | AGCCGC | 3 | 227788 | 227805 | 18 | 16.67% | 0.00% | 33.33% | 50.00% | 67540806 |
| 10. | NT_107008 | TGCCAC | 3 | 241639 | 241656 | 18 | 16.67% | 16.67% | 16.67% | 50.00% | Non-Coding |
| 11. | NT_107008 | TATTAG | 4 | 246090 | 246113 | 24 | 33.33% | 50.00% | 16.67% | 0.00% | Non-Coding |
| 12. | NT_107008 | AGTCAG | 3 | 248382 | 248398 | 17 | 33.33% | 16.67% | 33.33% | 16.67% | 67540816 |
| 13. | NT_107008 | TTGCTG | 3 | 263014 | 263031 | 18 | 0.00% | 50.00% | 33.33% | 16.67% | 67540824 |
| 14. | NT_107008 | GAAGAC | 5 | 269965 | 269994 | 30 | 50.00% | 0.00% | 33.33% | 16.67% | 67540830 |
| 15. | NT_107008 | GAAGAC | 3 | 270037 | 270054 | 18 | 50.00% | 0.00% | 33.33% | 16.67% | 67540830 |
| 16. | NT_107008 | CCCTTT | 4 | 273063 | 273086 | 24 | 0.00% | 50.00% | 0.00% | 50.00% | 67540832 |
| 17. | NT_107008 | TGCGCC | 3 | 302387 | 302404 | 18 | 0.00% | 16.67% | 33.33% | 50.00% | 67540846 |
| 18. | NT_107008 | CTGAGT | 3 | 304200 | 304223 | 24 | 16.67% | 33.33% | 33.33% | 16.67% | 67540848 |
| 19. | NT_107008 | CTCCTG | 3 | 368987 | 369004 | 18 | 0.00% | 33.33% | 16.67% | 50.00% | 67540892 |
| 20. | NT_107008 | GACGAT | 3 | 392995 | 393012 | 18 | 33.33% | 16.67% | 33.33% | 16.67% | 67540906 |
| 21. | NT_107008 | TGTTGC | 3 | 394304 | 394321 | 18 | 0.00% | 50.00% | 33.33% | 16.67% | 67540908 |
| 22. | NT_107008 | CATGCT | 3 | 404718 | 404735 | 18 | 16.67% | 33.33% | 16.67% | 33.33% | 67540912 |
| 23. | NT_107008 | CACGAC | 3 | 412978 | 412995 | 18 | 33.33% | 0.00% | 16.67% | 50.00% | 67540920 |
| 24. | NT_107008 | GCTGTC | 3 | 446398 | 446414 | 17 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 25. | NT_107008 | GCTGGA | 3 | 482409 | 482426 | 18 | 16.67% | 16.67% | 50.00% | 16.67% | 67540972 |
| 26. | NT_107008 | ATAGAA | 3 | 496460 | 496478 | 19 | 66.67% | 16.67% | 16.67% | 0.00% | Non-Coding |
| 27. | NT_107008 | GGACGA | 3 | 522227 | 522250 | 24 | 33.33% | 0.00% | 50.00% | 16.67% | Non-Coding |
| 28. | NT_107008 | AGCTTC | 3 | 533862 | 533878 | 17 | 16.67% | 33.33% | 16.67% | 33.33% | Non-Coding |
| 29. | NT_107008 | TACATG | 3 | 586788 | 586806 | 19 | 33.33% | 33.33% | 16.67% | 16.67% | Non-Coding |
| 30. | NT_107008 | TTCGTC | 3 | 598296 | 598313 | 18 | 0.00% | 50.00% | 16.67% | 33.33% | 67541044 |
| 31. | NT_107008 | GATGAC | 4 | 602158 | 602181 | 24 | 33.33% | 16.67% | 33.33% | 16.67% | 67541048 |
| 32. | NT_107008 | CGTGGG | 4 | 605138 | 605161 | 24 | 0.00% | 16.67% | 66.67% | 16.67% | 67541048 |
| 33. | NT_107008 | TGGCCT | 3 | 629115 | 629132 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 67541060 |
| 34. | NT_107008 | TGCGTT | 3 | 645528 | 645544 | 17 | 0.00% | 50.00% | 33.33% | 16.67% | Non-Coding |
| 35. | NT_107008 | CAGCCG | 3 | 655831 | 655848 | 18 | 16.67% | 0.00% | 33.33% | 50.00% | 67541076 |
| 36. | NT_107008 | CTTCAG | 3 | 701564 | 701581 | 18 | 16.67% | 33.33% | 16.67% | 33.33% | 67541100 |
| 37. | NT_107008 | CCTTTT | 5 | 701611 | 701640 | 30 | 0.00% | 66.67% | 0.00% | 33.33% | 67541100 |
| 38. | NT_107008 | GCTGAG | 4 | 702396 | 702419 | 24 | 16.67% | 16.67% | 50.00% | 16.67% | 67541100 |
| 39. | NT_107008 | TCGCGG | 4 | 702474 | 702497 | 24 | 0.00% | 16.67% | 50.00% | 33.33% | 67541100 |
| 40. | NT_107008 | TATCGT | 4 | 717817 | 717840 | 24 | 16.67% | 50.00% | 16.67% | 16.67% | Non-Coding |
| 41. | NT_107008 | CTCACG | 3 | 719844 | 719861 | 18 | 16.67% | 16.67% | 16.67% | 50.00% | 67541108 |
| 42. | NT_107008 | GAAAAA | 3 | 726432 | 726449 | 18 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 43. | NT_107008 | CTCCAG | 3 | 738612 | 738629 | 18 | 16.67% | 16.67% | 16.67% | 50.00% | Non-Coding |
| 44. | NT_107008 | ACTCAA | 3 | 767720 | 767737 | 18 | 50.00% | 16.67% | 0.00% | 33.33% | Non-Coding |
| 45. | NT_107008 | GAGCAT | 3 | 782588 | 782605 | 18 | 33.33% | 16.67% | 33.33% | 16.67% | 67541154 |
| 46. | NT_107008 | CACGCT | 3 | 786077 | 786094 | 18 | 16.67% | 16.67% | 16.67% | 50.00% | 67541156 |
| 47. | NT_107008 | TCGTCC | 3 | 790805 | 790823 | 19 | 0.00% | 33.33% | 16.67% | 50.00% | Non-Coding |
| 48. | NT_107008 | TAACAC | 3 | 790944 | 790961 | 18 | 50.00% | 16.67% | 0.00% | 33.33% | 67541160 |
| 49. | NT_107008 | TGGACC | 3 | 802353 | 802371 | 19 | 16.67% | 16.67% | 33.33% | 33.33% | Non-Coding |
| 50. | NT_107008 | ACTTCG | 3 | 803063 | 803080 | 18 | 16.67% | 33.33% | 16.67% | 33.33% | 67541168 |
| 51. | NT_107008 | TGCAGA | 3 | 806119 | 806136 | 18 | 33.33% | 16.67% | 33.33% | 16.67% | Non-Coding |
| 52. | NT_107008 | GCACTG | 3 | 822549 | 822572 | 24 | 16.67% | 16.67% | 33.33% | 33.33% | 67541184 |
| 53. | NT_107008 | GATGGG | 3 | 877910 | 877928 | 19 | 16.67% | 16.67% | 66.67% | 0.00% | 67541218 |
| 54. | NT_107008 | ACCCCA | 3 | 893690 | 893708 | 19 | 33.33% | 0.00% | 0.00% | 66.67% | 67541230 |
| 55. | NT_107008 | TTTTCT | 3 | 914899 | 914917 | 19 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 56. | NT_107008 | ATAAAA | 5 | 937961 | 937990 | 30 | 83.33% | 16.67% | 0.00% | 0.00% | 67541256 |
| 57. | NT_107008 | TTTCTC | 3 | 947220 | 947238 | 19 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 58. | NT_107008 | AGGCTG | 3 | 1017645 | 1017662 | 18 | 16.67% | 16.67% | 50.00% | 16.67% | 67541302 |
| 59. | NT_107008 | CTTTCC | 3 | 1018406 | 1018424 | 19 | 0.00% | 50.00% | 0.00% | 50.00% | 67541304 |
| 60. | NT_107008 | TGGAGT | 3 | 1021251 | 1021267 | 17 | 16.67% | 33.33% | 50.00% | 0.00% | Non-Coding |
| 61. | NT_107008 | CCCCAT | 3 | 1027648 | 1027665 | 18 | 16.67% | 16.67% | 0.00% | 66.67% | Non-Coding |
| 62. | NT_107008 | TTTCTC | 3 | 1030241 | 1030257 | 17 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 63. | NT_107008 | CGACCT | 3 | 1033555 | 1033572 | 18 | 16.67% | 16.67% | 16.67% | 50.00% | 67541312 |
| 64. | NT_107008 | CCTCTT | 3 | 1034730 | 1034747 | 18 | 0.00% | 50.00% | 0.00% | 50.00% | 67541312 |
| 65. | NT_107008 | CTTCCT | 3 | 1057684 | 1057701 | 18 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 66. | NT_107008 | CGCCAG | 3 | 1075626 | 1075644 | 19 | 16.67% | 0.00% | 33.33% | 50.00% | 67541334 |
| 67. | NT_107008 | TCGAGC | 3 | 1106168 | 1106186 | 19 | 16.67% | 16.67% | 33.33% | 33.33% | 67541362 |
| 68. | NT_107008 | GGGACG | 3 | 1107040 | 1107057 | 18 | 16.67% | 0.00% | 66.67% | 16.67% | 67541362 |
| 69. | NT_107008 | TCCGCC | 3 | 1110671 | 1110688 | 18 | 0.00% | 16.67% | 16.67% | 66.67% | Non-Coding |
| 70. | NT_107008 | TCATTA | 3 | 1115925 | 1115941 | 17 | 33.33% | 50.00% | 0.00% | 16.67% | Non-Coding |
| 71. | NT_107008 | TCTCCC | 3 | 1123278 | 1123295 | 18 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 72. | NT_107008 | AGGGCT | 3 | 1127977 | 1127995 | 19 | 16.67% | 16.67% | 50.00% | 16.67% | Non-Coding |
| 73. | NT_107008 | CTTGGT | 3 | 1128318 | 1128335 | 18 | 0.00% | 50.00% | 33.33% | 16.67% | Non-Coding |
| 74. | NT_107008 | AGGGTT | 3 | 1129765 | 1129783 | 19 | 16.67% | 33.33% | 50.00% | 0.00% | Non-Coding |
| 75. | NT_107008 | GACCTA | 3 | 1133902 | 1133919 | 18 | 33.33% | 16.67% | 16.67% | 33.33% | Non-Coding |
| 76. | NT_107008 | TTTTGC | 3 | 1139473 | 1139489 | 17 | 0.00% | 66.67% | 16.67% | 16.67% | Non-Coding |
| 77. | NT_107008 | GATATG | 4 | 1151027 | 1151050 | 24 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 78. | NT_107008 | GCTGGA | 3 | 1162769 | 1162786 | 18 | 16.67% | 16.67% | 50.00% | 16.67% | 67541406 |
| 79. | NT_107008 | CAGACC | 4 | 1162816 | 1162839 | 24 | 33.33% | 0.00% | 16.67% | 50.00% | 67541406 |
| 80. | NT_107008 | CATGCT | 3 | 1171575 | 1171593 | 19 | 16.67% | 33.33% | 16.67% | 33.33% | 67541410 |
| 81. | NT_107008 | GTTCAG | 3 | 1212076 | 1212093 | 18 | 16.67% | 33.33% | 33.33% | 16.67% | 67541434 |
| 82. | NT_107008 | TCTCTT | 3 | 1243289 | 1243306 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | 67541454 |
| 83. | NT_107008 | CGCCAC | 4 | 1243388 | 1243411 | 24 | 16.67% | 0.00% | 16.67% | 66.67% | 67541454 |
| 84. | NT_107008 | GTCGGA | 3 | 1254032 | 1254050 | 19 | 16.67% | 16.67% | 50.00% | 16.67% | 67541464 |
| 85. | NT_107008 | CCAACG | 4 | 1281587 | 1281610 | 24 | 33.33% | 0.00% | 16.67% | 50.00% | Non-Coding |
| 86. | NT_107008 | CGACCG | 3 | 1301555 | 1301572 | 18 | 16.67% | 0.00% | 33.33% | 50.00% | 67541498 |
| 87. | NT_107008 | CGGAGG | 3 | 1333227 | 1333245 | 19 | 16.67% | 0.00% | 66.67% | 16.67% | 67541516 |
| 88. | NT_107008 | TGAAAA | 4 | 1351944 | 1351967 | 24 | 66.67% | 16.67% | 16.67% | 0.00% | 67541541 |
| 89. | NT_107008 | AAAATA | 3 | 1352734 | 1352751 | 18 | 83.33% | 16.67% | 0.00% | 0.00% | 67541543 |
| 90. | NT_107008 | CCATTG | 3 | 1384961 | 1384978 | 18 | 16.67% | 33.33% | 16.67% | 33.33% | 67541563 |
| 91. | NT_107008 | TTTTCT | 3 | 1430171 | 1430188 | 18 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 92. | NT_107008 | CTTTTT | 3 | 1430190 | 1430208 | 19 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 93. | NT_107008 | TCTTTT | 3 | 1434156 | 1434173 | 18 | 0.00% | 83.33% | 0.00% | 16.67% | 67541591 |
| 94. | NT_107008 | GACGTC | 3 | 1458704 | 1458721 | 18 | 16.67% | 16.67% | 33.33% | 33.33% | 67541603 |
| 95. | NT_107008 | ATTCAG | 4 | 1471469 | 1471492 | 24 | 33.33% | 33.33% | 16.67% | 16.67% | Non-Coding |
| 96. | NT_107008 | TTGTCA | 3 | 1479290 | 1479307 | 18 | 16.67% | 50.00% | 16.67% | 16.67% | 67541617 |
| 97. | NT_107008 | AGCAAG | 3 | 1480850 | 1480868 | 19 | 50.00% | 0.00% | 33.33% | 16.67% | Non-Coding |