List of
Imperfect Hexa
-nucleotide repeats in Aspergillus nidulans FGSC A4
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NT_107007 | TCCGAG | 6 | 30998 | 31033 | 36 | 16.67% | 16.67% | 33.33% | 33.33% | 67541629 |
| 2. | NT_107007 | CTTTTT | 3 | 32190 | 32207 | 18 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 3. | NT_107007 | GTTCAA | 3 | 70197 | 70214 | 18 | 33.33% | 33.33% | 16.67% | 16.67% | 67541655 |
| 4. | NT_107007 | GATCGC | 4 | 97694 | 97717 | 24 | 16.67% | 16.67% | 33.33% | 33.33% | 67541681 |
| 5. | NT_107007 | CATCTC | 3 | 122416 | 122433 | 18 | 16.67% | 33.33% | 0.00% | 50.00% | Non-Coding |
| 6. | NT_107007 | CATATC | 3 | 125180 | 125197 | 18 | 33.33% | 33.33% | 0.00% | 33.33% | 67541699 |
| 7. | NT_107007 | CCCTCC | 3 | 141681 | 141698 | 18 | 0.00% | 16.67% | 0.00% | 83.33% | 67541711 |
| 8. | NT_107007 | ATTTAT | 3 | 172764 | 172782 | 19 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 9. | NT_107007 | AAAAAG | 3 | 186522 | 186539 | 18 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 10. | NT_107007 | TGGGGC | 3 | 215129 | 215146 | 18 | 0.00% | 16.67% | 66.67% | 16.67% | 67541749 |
| 11. | NT_107007 | CTTCCA | 4 | 224399 | 224422 | 24 | 16.67% | 33.33% | 0.00% | 50.00% | 67541755 |
| 12. | NT_107007 | ACAGCC | 3 | 256173 | 256190 | 18 | 33.33% | 0.00% | 16.67% | 50.00% | 67541777 |
| 13. | NT_107007 | CAAAGC | 3 | 317743 | 317760 | 18 | 50.00% | 0.00% | 16.67% | 33.33% | 67541815 |
| 14. | NT_107007 | AGAGTC | 3 | 321062 | 321079 | 18 | 33.33% | 16.67% | 33.33% | 16.67% | 67541819 |
| 15. | NT_107007 | TAAAAA | 5 | 322170 | 322199 | 30 | 83.33% | 16.67% | 0.00% | 0.00% | Non-Coding |
| 16. | NT_107007 | GCATCG | 3 | 323759 | 323776 | 18 | 16.67% | 16.67% | 33.33% | 33.33% | Non-Coding |
| 17. | NT_107007 | ATTTTT | 5 | 332304 | 332334 | 31 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 18. | NT_107007 | CGCTTC | 3 | 429434 | 429450 | 17 | 0.00% | 33.33% | 16.67% | 50.00% | 67541879 |
| 19. | NT_107007 | CGACAG | 4 | 439145 | 439168 | 24 | 33.33% | 0.00% | 33.33% | 33.33% | 67541883 |
| 20. | NT_107007 | AGGATG | 3 | 484537 | 484554 | 18 | 33.33% | 16.67% | 50.00% | 0.00% | Non-Coding |
| 21. | NT_107007 | GAGTAC | 3 | 534103 | 534120 | 18 | 33.33% | 16.67% | 33.33% | 16.67% | Non-Coding |
| 22. | NT_107007 | CGATAA | 4 | 554288 | 554310 | 23 | 50.00% | 16.67% | 16.67% | 16.67% | 67541945 |
| 23. | NT_107007 | CAACCA | 4 | 577755 | 577778 | 24 | 50.00% | 0.00% | 0.00% | 50.00% | 67541967 |
| 24. | NT_107007 | TTGATG | 3 | 642809 | 642826 | 18 | 16.67% | 50.00% | 33.33% | 0.00% | Non-Coding |
| 25. | NT_107007 | TATTTG | 3 | 673155 | 673172 | 18 | 16.67% | 66.67% | 16.67% | 0.00% | Non-Coding |
| 26. | NT_107007 | AGGTCA | 4 | 687536 | 687559 | 24 | 33.33% | 16.67% | 33.33% | 16.67% | Non-Coding |
| 27. | NT_107007 | TGACAC | 3 | 747543 | 747560 | 18 | 33.33% | 16.67% | 16.67% | 33.33% | 67542079 |
| 28. | NT_107007 | ACCAGG | 3 | 752009 | 752026 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | 67542085 |
| 29. | NT_107007 | ACGAGG | 3 | 772318 | 772335 | 18 | 33.33% | 0.00% | 50.00% | 16.67% | 67900452 |
| 30. | NT_107007 | CTTTTT | 3 | 796489 | 796506 | 18 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 31. | NT_107007 | CTCCAC | 4 | 822953 | 822975 | 23 | 16.67% | 16.67% | 0.00% | 66.67% | 67900480 |
| 32. | NT_107007 | ATTTTT | 3 | 831672 | 831690 | 19 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 33. | NT_107007 | ATAATG | 3 | 880727 | 880744 | 18 | 50.00% | 33.33% | 16.67% | 0.00% | Non-Coding |
| 34. | NT_107007 | TCTGGG | 4 | 917763 | 917786 | 24 | 0.00% | 33.33% | 50.00% | 16.67% | 67900540 |
| 35. | NT_107007 | CTGCAG | 4 | 929725 | 929748 | 24 | 16.67% | 16.67% | 33.33% | 33.33% | 67900550 |
| 36. | NT_107007 | TATGCT | 4 | 1026468 | 1026491 | 24 | 16.67% | 50.00% | 16.67% | 16.67% | Non-Coding |
| 37. | NT_107007 | ACCAGA | 3 | 1052754 | 1052771 | 18 | 50.00% | 0.00% | 16.67% | 33.33% | Non-Coding |
| 38. | NT_107007 | GAACAA | 3 | 1060144 | 1060161 | 18 | 66.67% | 0.00% | 16.67% | 16.67% | 67900624 |
| 39. | NT_107007 | AATCCA | 3 | 1110877 | 1110894 | 18 | 50.00% | 16.67% | 0.00% | 33.33% | 67900658 |
| 40. | NT_107007 | GCTCCG | 4 | 1135702 | 1135725 | 24 | 0.00% | 16.67% | 33.33% | 50.00% | 67900678 |
| 41. | NT_107007 | ATGACG | 3 | 1139465 | 1139482 | 18 | 33.33% | 16.67% | 33.33% | 16.67% | 67900680 |
| 42. | NT_107007 | CAGATG | 4 | 1145121 | 1145144 | 24 | 33.33% | 16.67% | 33.33% | 16.67% | 67900686 |
| 43. | NT_107007 | TGCCCT | 3 | 1161127 | 1161144 | 18 | 0.00% | 33.33% | 16.67% | 50.00% | Non-Coding |
| 44. | NT_107007 | GAGCAC | 3 | 1172428 | 1172445 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | 67900702 |
| 45. | NT_107007 | AAAGAA | 3 | 1190771 | 1190788 | 18 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 46. | NT_107007 | GTCTCG | 3 | 1216841 | 1216858 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 47. | NT_107007 | AGCCCC | 3 | 1218477 | 1218494 | 18 | 16.67% | 0.00% | 16.67% | 66.67% | 67900726 |
| 48. | NT_107007 | TCCTCG | 3 | 1220373 | 1220389 | 17 | 0.00% | 33.33% | 16.67% | 50.00% | Non-Coding |
| 49. | NT_107007 | TACGGT | 3 | 1229197 | 1229214 | 18 | 16.67% | 33.33% | 33.33% | 16.67% | Non-Coding |
| 50. | NT_107007 | TTCATA | 3 | 1243303 | 1243320 | 18 | 33.33% | 50.00% | 0.00% | 16.67% | 67900746 |
| 51. | NT_107007 | CAGAGC | 4 | 1268291 | 1268314 | 24 | 33.33% | 0.00% | 33.33% | 33.33% | 67900762 |
| 52. | NT_107007 | TACCCA | 3 | 1291193 | 1291211 | 19 | 33.33% | 16.67% | 0.00% | 50.00% | 67900778 |
| 53. | NT_107007 | TTTATT | 4 | 1297035 | 1297058 | 24 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 54. | NT_107007 | CTTGCC | 3 | 1348385 | 1348402 | 18 | 0.00% | 33.33% | 16.67% | 50.00% | 67900818 |