List of
Imperfect Penta
-nucleotide repeats in Aspergillus nidulans FGSC A4
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NT_107004 | GGCGG | 3 | 9483 | 9497 | 15 | 0.00% | 0.00% | 80.00% | 20.00% | Non-Coding |
| 2. | NT_107004 | ACTTC | 4 | 63533 | 63551 | 19 | 20.00% | 40.00% | 0.00% | 40.00% | 67902626 |
| 3. | NT_107004 | GCTGA | 3 | 67580 | 67593 | 14 | 20.00% | 20.00% | 40.00% | 20.00% | 67902626 |
| 4. | NT_107004 | GACGC | 3 | 93146 | 93160 | 15 | 20.00% | 0.00% | 40.00% | 40.00% | Non-Coding |
| 5. | NT_107004 | GTGAT | 3 | 112100 | 112113 | 14 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 6. | NT_107004 | TGGTT | 4 | 115534 | 115553 | 20 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 7. | NT_107004 | GATTT | 5 | 115554 | 115578 | 25 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 8. | NT_107004 | ACCCG | 3 | 147371 | 147385 | 15 | 20.00% | 0.00% | 20.00% | 60.00% | 67902668 |
| 9. | NT_107004 | GGCGG | 5 | 157206 | 157230 | 25 | 0.00% | 0.00% | 80.00% | 20.00% | Non-Coding |
| 10. | NT_107004 | GGGAG | 3 | 170746 | 170760 | 15 | 20.00% | 0.00% | 80.00% | 0.00% | Non-Coding |
| 11. | NT_107004 | GGCCA | 3 | 172323 | 172337 | 15 | 20.00% | 0.00% | 40.00% | 40.00% | Non-Coding |
| 12. | NT_107004 | TTTTA | 3 | 229514 | 229528 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 13. | NT_107004 | AGTCG | 3 | 264107 | 264120 | 14 | 20.00% | 20.00% | 40.00% | 20.00% | 67902756 |
| 14. | NT_107004 | ATTAT | 3 | 274364 | 274378 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 15. | NT_107004 | CCAAA | 3 | 324266 | 324279 | 14 | 60.00% | 0.00% | 0.00% | 40.00% | 67902784 |
| 16. | NT_107004 | CAAGC | 3 | 367257 | 367271 | 15 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |
| 17. | NT_107004 | GTAGG | 3 | 394613 | 394627 | 15 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 18. | NT_107004 | GCTAT | 5 | 416955 | 416979 | 25 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 19. | NT_107004 | ATTTT | 3 | 477713 | 477727 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 20. | NT_107004 | TATTT | 15 | 477736 | 477805 | 70 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 21. | NT_107004 | TATGC | 3 | 495782 | 495796 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | 67902892 |
| 22. | NT_107004 | TTACA | 3 | 530197 | 530211 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 23. | NT_107004 | TATTC | 3 | 530215 | 530229 | 15 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 24. | NT_107004 | TACTT | 3 | 530230 | 530244 | 15 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 25. | NT_107004 | TTGCA | 3 | 531820 | 531834 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 26. | NT_107004 | GCCGG | 3 | 532422 | 532435 | 14 | 0.00% | 0.00% | 60.00% | 40.00% | 67902916 |
| 27. | NT_107004 | CCAGG | 4 | 533501 | 533519 | 19 | 20.00% | 0.00% | 40.00% | 40.00% | 67902916 |
| 28. | NT_107004 | TCCTT | 4 | 536197 | 536216 | 20 | 0.00% | 60.00% | 0.00% | 40.00% | Non-Coding |
| 29. | NT_107004 | TCTTT | 9 | 536250 | 536292 | 43 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 30. | NT_107004 | AGTGG | 3 | 556901 | 556914 | 14 | 20.00% | 20.00% | 60.00% | 0.00% | 67902928 |
| 31. | NT_107004 | TCTTT | 5 | 591268 | 591292 | 25 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 32. | NT_107004 | GTCCC | 3 | 663845 | 663859 | 15 | 0.00% | 20.00% | 20.00% | 60.00% | 67902990 |
| 33. | NT_107004 | TGGGA | 3 | 670263 | 670276 | 14 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 34. | NT_107004 | TGGAC | 4 | 749952 | 749970 | 19 | 20.00% | 20.00% | 40.00% | 20.00% | 67903044 |
| 35. | NT_107004 | CCGCG | 3 | 754794 | 754808 | 15 | 0.00% | 0.00% | 40.00% | 60.00% | 67903048 |
| 36. | NT_107004 | ATGGT | 3 | 781987 | 782000 | 14 | 20.00% | 40.00% | 40.00% | 0.00% | 67903074 |
| 37. | NT_107004 | TTCCA | 3 | 798566 | 798579 | 14 | 20.00% | 40.00% | 0.00% | 40.00% | 67903086 |
| 38. | NT_107004 | GAATG | 3 | 827387 | 827400 | 14 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 39. | NT_107004 | TGCAC | 3 | 841036 | 841051 | 16 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 40. | NT_107004 | CGGCG | 3 | 872887 | 872900 | 14 | 0.00% | 0.00% | 60.00% | 40.00% | 67903132 |
| 41. | NT_107004 | CTTTT | 5 | 880346 | 880368 | 23 | 0.00% | 80.00% | 0.00% | 20.00% | 67903138 |
| 42. | NT_107004 | CCACT | 3 | 884504 | 884517 | 14 | 20.00% | 20.00% | 0.00% | 60.00% | 67903140 |
| 43. | NT_107004 | ACATC | 3 | 888116 | 888130 | 15 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |
| 44. | NT_107004 | CTCAC | 3 | 896688 | 896701 | 14 | 20.00% | 20.00% | 0.00% | 60.00% | Non-Coding |
| 45. | NT_107004 | CCGCA | 3 | 950035 | 950049 | 15 | 20.00% | 0.00% | 20.00% | 60.00% | Non-Coding |
| 46. | NT_107004 | ACTAC | 3 | 951263 | 951277 | 15 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |