List of
Imperfect Penta
-nucleotide repeats in Naumovozyma castellii CBS 4309
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_016500 | TCTGT | 3 | 59322 | 59335 | 14 | 0.00% | 60.00% | 20.00% | 20.00% | 366997194 |
| 2. | NC_016500 | AATCT | 3 | 61060 | 61074 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | 366997198 |
| 3. | NC_016500 | GGCTG | 3 | 82962 | 82976 | 15 | 0.00% | 20.00% | 60.00% | 20.00% | Non-Coding |
| 4. | NC_016500 | CTCAT | 6 | 87015 | 87044 | 30 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 5. | NC_016500 | ATTGT | 3 | 92380 | 92393 | 14 | 20.00% | 60.00% | 20.00% | 0.00% | 366997234 |
| 6. | NC_016500 | GTTTT | 3 | 96067 | 96080 | 14 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 7. | NC_016500 | ATACG | 3 | 99017 | 99031 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 8. | NC_016500 | GAAGG | 5 | 99205 | 99229 | 25 | 40.00% | 0.00% | 60.00% | 0.00% | Non-Coding |
| 9. | NC_016500 | GATGT | 3 | 99332 | 99346 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 10. | NC_016500 | TTTGT | 4 | 100776 | 100794 | 19 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 11. | NC_016500 | GCTTT | 3 | 134785 | 134798 | 14 | 0.00% | 60.00% | 20.00% | 20.00% | 366997272 |
| 12. | NC_016500 | CTTTT | 3 | 135160 | 135174 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | 366997272 |
| 13. | NC_016500 | TAGAA | 3 | 140499 | 140512 | 14 | 60.00% | 20.00% | 20.00% | 0.00% | 366997278 |
| 14. | NC_016500 | CAGAT | 3 | 146104 | 146118 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 15. | NC_016500 | TATAA | 3 | 154140 | 154154 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 16. | NC_016500 | AAGAA | 3 | 168215 | 168230 | 16 | 80.00% | 0.00% | 20.00% | 0.00% | 366997312 |
| 17. | NC_016500 | GAATA | 3 | 197508 | 197521 | 14 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 18. | NC_016500 | CTAAA | 4 | 201179 | 201199 | 21 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 19. | NC_016500 | TTTGT | 3 | 225438 | 225451 | 14 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 20. | NC_016500 | AAAGG | 3 | 229939 | 229953 | 15 | 60.00% | 0.00% | 40.00% | 0.00% | Non-Coding |
| 21. | NC_016500 | TATTG | 3 | 232521 | 232535 | 15 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 22. | NC_016500 | ATGTA | 3 | 233801 | 233815 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | 366997380 |
| 23. | NC_016500 | GAATT | 3 | 236380 | 236393 | 14 | 40.00% | 40.00% | 20.00% | 0.00% | 366997384 |
| 24. | NC_016500 | AAGAT | 3 | 250589 | 250602 | 14 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 25. | NC_016500 | AAATA | 5 | 266344 | 266367 | 24 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 26. | NC_016500 | TCATT | 3 | 266437 | 266451 | 15 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 27. | NC_016500 | TGCTG | 3 | 285921 | 285935 | 15 | 0.00% | 40.00% | 40.00% | 20.00% | Non-Coding |
| 28. | NC_016500 | ATTTG | 3 | 300141 | 300155 | 15 | 20.00% | 60.00% | 20.00% | 0.00% | 366997442 |
| 29. | NC_016500 | CAATG | 5 | 308512 | 308534 | 23 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 30. | NC_016500 | AGGAC | 3 | 308653 | 308667 | 15 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 31. | NC_016500 | GTATG | 5 | 312822 | 312846 | 25 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 32. | NC_016500 | TCTTT | 3 | 315916 | 315930 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 33. | NC_016500 | TTTTA | 3 | 347659 | 347672 | 14 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 34. | NC_016500 | TTATA | 4 | 372572 | 372592 | 21 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 35. | NC_016500 | AACAA | 3 | 399501 | 399515 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 36. | NC_016500 | TTTTA | 3 | 406111 | 406125 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 37. | NC_016500 | TACAT | 4 | 424000 | 424020 | 21 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 38. | NC_016500 | CGATG | 3 | 424122 | 424136 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 39. | NC_016500 | ATAAA | 3 | 433272 | 433286 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 40. | NC_016500 | TTTTC | 3 | 436322 | 436336 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 41. | NC_016500 | TTCTA | 3 | 445819 | 445832 | 14 | 20.00% | 60.00% | 0.00% | 20.00% | 366997568 |
| 42. | NC_016500 | ATTCT | 3 | 464523 | 464536 | 14 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |