List of
Perfect Tetra
-nucleotide repeats in Naumovozyma castellii CBS 4309
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_016498 | TCAT | 3 | 13557 | 13568 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 2. | NC_016498 | GCAG | 3 | 55629 | 55640 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 3. | NC_016498 | TCTT | 3 | 64655 | 64666 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 366995866 |
| 4. | NC_016498 | TGTA | 3 | 76824 | 76835 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 5. | NC_016498 | ATTA | 3 | 80558 | 80569 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 6. | NC_016498 | TCAA | 3 | 86928 | 86939 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 7. | NC_016498 | CCAA | 3 | 86940 | 86951 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 8. | NC_016498 | ACAA | 3 | 87578 | 87589 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 9. | NC_016498 | AACA | 3 | 135303 | 135314 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 10. | NC_016498 | TTTA | 3 | 144939 | 144950 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 11. | NC_016498 | ATAA | 3 | 180316 | 180327 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 12. | NC_016498 | AGAT | 3 | 192159 | 192170 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 13. | NC_016498 | AAGA | 3 | 196892 | 196903 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 14. | NC_016498 | AAAT | 3 | 228472 | 228483 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | 366996032 |
| 15. | NC_016498 | AAGA | 3 | 233897 | 233908 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 16. | NC_016498 | AAAT | 3 | 235413 | 235424 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 17. | NC_016498 | TGAA | 3 | 240671 | 240682 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 18. | NC_016498 | ACTA | 3 | 258480 | 258491 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | 366996062 |
| 19. | NC_016498 | TTAT | 3 | 271671 | 271682 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 20. | NC_016498 | AAGA | 3 | 284339 | 284350 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 21. | NC_016498 | GTTA | 3 | 292739 | 292750 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 22. | NC_016498 | ATTA | 3 | 294795 | 294806 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 23. | NC_016498 | ACTC | 3 | 324659 | 324670 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 24. | NC_016498 | GATC | 3 | 329340 | 329351 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 25. | NC_016498 | ATCG | 3 | 336495 | 336506 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 26. | NC_016498 | TGTT | 3 | 341427 | 341438 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 27. | NC_016498 | AATC | 3 | 341543 | 341554 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | 366996146 |
| 28. | NC_016498 | AAAC | 3 | 352871 | 352882 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 29. | NC_016498 | ATAA | 3 | 358962 | 358973 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 30. | NC_016498 | GTAC | 3 | 378030 | 378041 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 31. | NC_016498 | TTGA | 3 | 415090 | 415101 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | 366996214 |
| 32. | NC_016498 | GAAA | 3 | 418364 | 418375 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 366996216 |
| 33. | NC_016498 | GATT | 3 | 435088 | 435099 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 34. | NC_016498 | CGAA | 3 | 439552 | 439563 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 35. | NC_016498 | AGCG | 3 | 439674 | 439685 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 36. | NC_016498 | ACAT | 3 | 439895 | 439906 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | 366996236 |
| 37. | NC_016498 | AGTT | 3 | 490935 | 490946 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 38. | NC_016498 | GTAA | 3 | 492148 | 492159 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 39. | NC_016498 | TATT | 3 | 505654 | 505665 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 40. | NC_016498 | ATTA | 4 | 542720 | 542735 | 16 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 41. | NC_016498 | TGAT | 3 | 546182 | 546193 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 42. | NC_016498 | ATGA | 3 | 546271 | 546282 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 43. | NC_016498 | AATT | 3 | 560489 | 560500 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | 366996358 |
| 44. | NC_016498 | ATTA | 3 | 560578 | 560589 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 45. | NC_016498 | TGTA | 3 | 572882 | 572893 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 46. | NC_016498 | AATA | 3 | 574627 | 574638 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 47. | NC_016498 | ATTC | 3 | 595426 | 595437 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 48. | NC_016498 | ATCC | 3 | 608482 | 608493 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 49. | NC_016498 | ATTT | 3 | 610054 | 610065 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 50. | NC_016498 | GAAA | 3 | 610776 | 610787 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 366996422 |
| 51. | NC_016498 | ATAA | 6 | 611483 | 611506 | 24 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 52. | NC_016498 | AGAT | 3 | 627705 | 627716 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 53. | NC_016498 | TAAG | 3 | 635229 | 635240 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 54. | NC_016498 | GTGA | 3 | 640626 | 640637 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 55. | NC_016498 | CATC | 3 | 646869 | 646880 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 56. | NC_016498 | ATTT | 3 | 658179 | 658190 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | 366996486 |
| 57. | NC_016498 | ATTT | 3 | 668395 | 668406 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 58. | NC_016498 | ATAA | 4 | 680814 | 680829 | 16 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |