List of
Imperfect Penta
-nucleotide repeats in Naumovozyma castellii CBS 4309
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_016498 | TTTTA | 3 | 14415 | 14428 | 14 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NC_016498 | CGTGG | 3 | 22305 | 22319 | 15 | 0.00% | 20.00% | 60.00% | 20.00% | Non-Coding |
| 3. | NC_016498 | TTTAT | 4 | 78188 | 78206 | 19 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 4. | NC_016498 | ACATT | 3 | 86746 | 86760 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 5. | NC_016498 | ATTGG | 3 | 89800 | 89814 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | 366995898 |
| 6. | NC_016498 | AGCAA | 4 | 98302 | 98321 | 20 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 7. | NC_016498 | TCAAT | 3 | 125563 | 125577 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | 366995934 |
| 8. | NC_016498 | TTTGT | 7 | 133518 | 133553 | 36 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 9. | NC_016498 | ACAAA | 3 | 143864 | 143878 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 10. | NC_016498 | TAAAA | 3 | 148947 | 148961 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | 366995958 |
| 11. | NC_016498 | TCAGA | 6 | 167669 | 167698 | 30 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 12. | NC_016498 | TCATC | 5 | 167804 | 167828 | 25 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 13. | NC_016498 | CTTTT | 3 | 174644 | 174659 | 16 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 14. | NC_016498 | TTTGA | 3 | 178161 | 178176 | 16 | 20.00% | 60.00% | 20.00% | 0.00% | 366995982 |
| 15. | NC_016498 | TTGAG | 5 | 182053 | 182077 | 25 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 16. | NC_016498 | AAATG | 3 | 187775 | 187789 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 17. | NC_016498 | CAAAA | 3 | 187919 | 187933 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 18. | NC_016498 | ATAAC | 3 | 194750 | 194764 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 19. | NC_016498 | GTGAA | 3 | 196743 | 196757 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 20. | NC_016498 | TATAA | 3 | 215933 | 215946 | 14 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 21. | NC_016498 | ATCTC | 3 | 216187 | 216200 | 14 | 20.00% | 40.00% | 0.00% | 40.00% | 366996018 |
| 22. | NC_016498 | TGTTC | 5 | 218563 | 218587 | 25 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 23. | NC_016498 | AACCA | 3 | 225392 | 225405 | 14 | 60.00% | 0.00% | 0.00% | 40.00% | 366996028 |
| 24. | NC_016498 | ATTTG | 3 | 238809 | 238824 | 16 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 25. | NC_016498 | TATTC | 4 | 240974 | 240993 | 20 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 26. | NC_016498 | TAAAA | 3 | 243439 | 243454 | 16 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 27. | NC_016498 | ATGGT | 3 | 247772 | 247785 | 14 | 20.00% | 40.00% | 40.00% | 0.00% | 366996050 |
| 28. | NC_016498 | TTTTC | 3 | 255514 | 255527 | 14 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 29. | NC_016498 | ACAAA | 4 | 275522 | 275546 | 25 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 30. | NC_016498 | ACTAT | 3 | 284451 | 284464 | 14 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 31. | NC_016498 | ATTCT | 3 | 286179 | 286193 | 15 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 32. | NC_016498 | TGAAT | 3 | 295704 | 295717 | 14 | 40.00% | 40.00% | 20.00% | 0.00% | 366996098 |
| 33. | NC_016498 | CAATA | 5 | 317432 | 317455 | 24 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 34. | NC_016498 | TAGAA | 3 | 319172 | 319186 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 35. | NC_016498 | TTAGC | 3 | 323164 | 323177 | 14 | 20.00% | 40.00% | 20.00% | 20.00% | 366996130 |
| 36. | NC_016498 | TCTTG | 3 | 324683 | 324697 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 37. | NC_016498 | ATTCT | 3 | 327249 | 327264 | 16 | 20.00% | 60.00% | 0.00% | 20.00% | 366996134 |
| 38. | NC_016498 | CATCT | 3 | 340844 | 340858 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 39. | NC_016498 | CAATA | 3 | 345134 | 345148 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 40. | NC_016498 | TATTG | 4 | 351446 | 351466 | 21 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 41. | NC_016498 | AATAT | 3 | 386502 | 386516 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 42. | NC_016498 | ATGTA | 3 | 389365 | 389378 | 14 | 40.00% | 40.00% | 20.00% | 0.00% | 366996188 |
| 43. | NC_016498 | GTAGT | 3 | 398106 | 398120 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 44. | NC_016498 | TAATT | 3 | 410299 | 410312 | 14 | 40.00% | 60.00% | 0.00% | 0.00% | 366996208 |
| 45. | NC_016498 | CAAGA | 3 | 453547 | 453561 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | 366996248 |
| 46. | NC_016498 | AAATT | 3 | 462945 | 462959 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 47. | NC_016498 | ATATT | 3 | 467780 | 467793 | 14 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 48. | NC_016498 | TACAT | 3 | 489566 | 489580 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 49. | NC_016498 | ACTTT | 3 | 499516 | 499529 | 14 | 20.00% | 60.00% | 0.00% | 20.00% | 366996292 |
| 50. | NC_016498 | ACTCA | 3 | 504683 | 504696 | 14 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |
| 51. | NC_016498 | TAAAA | 3 | 505698 | 505713 | 16 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 52. | NC_016498 | ATGTA | 3 | 508981 | 508995 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | 366996298 |
| 53. | NC_016498 | TTATA | 3 | 509110 | 509123 | 14 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 54. | NC_016498 | CTTGC | 3 | 511421 | 511435 | 15 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 55. | NC_016498 | ATGAG | 5 | 536009 | 536033 | 25 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 56. | NC_016498 | GATGT | 5 | 546958 | 546982 | 25 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 57. | NC_016498 | GATGG | 3 | 568038 | 568051 | 14 | 20.00% | 20.00% | 60.00% | 0.00% | 366996368 |
| 58. | NC_016498 | AAACA | 3 | 568328 | 568342 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 59. | NC_016498 | CAACT | 3 | 570217 | 570230 | 14 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |
| 60. | NC_016498 | ATGGT | 5 | 581281 | 581304 | 24 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 61. | NC_016498 | TTAAT | 5 | 585069 | 585093 | 25 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 62. | NC_016498 | AAAAC | 3 | 589175 | 589190 | 16 | 80.00% | 0.00% | 0.00% | 20.00% | 366996400 |
| 63. | NC_016498 | TTGAG | 6 | 595312 | 595341 | 30 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 64. | NC_016498 | TGATC | 3 | 599708 | 599727 | 20 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 65. | NC_016498 | TAAAA | 3 | 604309 | 604322 | 14 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 66. | NC_016498 | TTTTA | 3 | 604501 | 604515 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 67. | NC_016498 | TAGTG | 3 | 608820 | 608834 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 68. | NC_016498 | TAGTG | 3 | 608844 | 608858 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 69. | NC_016498 | CAACA | 3 | 609125 | 609144 | 20 | 60.00% | 0.00% | 0.00% | 40.00% | 366996420 |
| 70. | NC_016498 | TTCCA | 3 | 616623 | 616637 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | 366996428 |
| 71. | NC_016498 | TAGTA | 3 | 635189 | 635203 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 72. | NC_016498 | TACAC | 5 | 637243 | 637267 | 25 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |
| 73. | NC_016498 | GGAAA | 3 | 646847 | 646860 | 14 | 60.00% | 0.00% | 40.00% | 0.00% | Non-Coding |
| 74. | NC_016498 | TAACA | 3 | 647390 | 647404 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 75. | NC_016498 | ACATT | 3 | 651703 | 651716 | 14 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 76. | NC_016498 | TCAAT | 3 | 656945 | 656958 | 14 | 40.00% | 40.00% | 0.00% | 20.00% | 366996484 |
| 77. | NC_016498 | AAAAG | 4 | 676910 | 676928 | 19 | 80.00% | 0.00% | 20.00% | 0.00% | 366996498 |