List of
Imperfect Hexa
-nucleotide repeats in Naumovozyma castellii CBS 4309
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_016498 | AGATGT | 3 | 7838 | 7855 | 18 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 2. | NC_016498 | CTCTTG | 3 | 54811 | 54828 | 18 | 0.00% | 50.00% | 16.67% | 33.33% | 366995858 |
| 3. | NC_016498 | TGGAAT | 3 | 76288 | 76306 | 19 | 33.33% | 33.33% | 33.33% | 0.00% | 366995878 |
| 4. | NC_016498 | TAAGAA | 3 | 79973 | 79990 | 18 | 66.67% | 16.67% | 16.67% | 0.00% | 366995882 |
| 5. | NC_016498 | CGAATT | 4 | 86103 | 86126 | 24 | 33.33% | 33.33% | 16.67% | 16.67% | Non-Coding |
| 6. | NC_016498 | ATGAAT | 3 | 101383 | 101400 | 18 | 50.00% | 33.33% | 16.67% | 0.00% | 366995914 |
| 7. | NC_016498 | CAAATC | 3 | 101573 | 101590 | 18 | 50.00% | 16.67% | 0.00% | 33.33% | 366995914 |
| 8. | NC_016498 | CAACAG | 4 | 118468 | 118491 | 24 | 50.00% | 0.00% | 16.67% | 33.33% | 366995928 |
| 9. | NC_016498 | CAACAG | 4 | 118978 | 119001 | 24 | 50.00% | 0.00% | 16.67% | 33.33% | 366995928 |
| 10. | NC_016498 | AAAACA | 5 | 127368 | 127396 | 29 | 83.33% | 0.00% | 0.00% | 16.67% | Non-Coding |
| 11. | NC_016498 | TTGTCA | 4 | 140436 | 140459 | 24 | 16.67% | 50.00% | 16.67% | 16.67% | Non-Coding |
| 12. | NC_016498 | CAGTAG | 3 | 148438 | 148455 | 18 | 33.33% | 16.67% | 33.33% | 16.67% | 366995958 |
| 13. | NC_016498 | CAAAAA | 3 | 152998 | 153015 | 18 | 83.33% | 0.00% | 0.00% | 16.67% | Non-Coding |
| 14. | NC_016498 | TTCAGG | 3 | 160397 | 160414 | 18 | 16.67% | 33.33% | 33.33% | 16.67% | 366995966 |
| 15. | NC_016498 | AGATGA | 4 | 168117 | 168140 | 24 | 50.00% | 16.67% | 33.33% | 0.00% | 366995972 |
| 16. | NC_016498 | TGGGTT | 3 | 181008 | 181025 | 18 | 0.00% | 50.00% | 50.00% | 0.00% | 366995986 |
| 17. | NC_016498 | ATTCAT | 3 | 186721 | 186739 | 19 | 33.33% | 50.00% | 0.00% | 16.67% | 366995992 |
| 18. | NC_016498 | ACTTCC | 3 | 194226 | 194243 | 18 | 16.67% | 33.33% | 0.00% | 50.00% | 366995998 |
| 19. | NC_016498 | CGTCTT | 3 | 202776 | 202793 | 18 | 0.00% | 50.00% | 16.67% | 33.33% | 366996006 |
| 20. | NC_016498 | CTTCCT | 3 | 206609 | 206626 | 18 | 0.00% | 50.00% | 0.00% | 50.00% | 366996010 |
| 21. | NC_016498 | TATTTA | 4 | 222066 | 222089 | 24 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 22. | NC_016498 | CAATCG | 3 | 235719 | 235736 | 18 | 33.33% | 16.67% | 16.67% | 33.33% | Non-Coding |
| 23. | NC_016498 | TAGGGT | 3 | 240497 | 240515 | 19 | 16.67% | 33.33% | 50.00% | 0.00% | 366996044 |
| 24. | NC_016498 | AAAAAT | 4 | 257918 | 257941 | 24 | 83.33% | 16.67% | 0.00% | 0.00% | Non-Coding |
| 25. | NC_016498 | CTGTTG | 5 | 266090 | 266119 | 30 | 0.00% | 50.00% | 33.33% | 16.67% | 366996070 |
| 26. | NC_016498 | TTATCA | 3 | 274005 | 274022 | 18 | 33.33% | 50.00% | 0.00% | 16.67% | 366996078 |
| 27. | NC_016498 | AAACCG | 4 | 276109 | 276132 | 24 | 50.00% | 0.00% | 16.67% | 33.33% | 366996080 |
| 28. | NC_016498 | TATGTA | 4 | 287256 | 287279 | 24 | 33.33% | 50.00% | 16.67% | 0.00% | Non-Coding |
| 29. | NC_016498 | GCTCCT | 3 | 287641 | 287658 | 18 | 0.00% | 33.33% | 16.67% | 50.00% | 366996092 |
| 30. | NC_016498 | TTTCAG | 3 | 310494 | 310511 | 18 | 16.67% | 50.00% | 16.67% | 16.67% | 366996114 |
| 31. | NC_016498 | GAAGAT | 3 | 311458 | 311475 | 18 | 50.00% | 16.67% | 33.33% | 0.00% | 366996114 |
| 32. | NC_016498 | GAGTTT | 3 | 339329 | 339346 | 18 | 16.67% | 50.00% | 33.33% | 0.00% | 366996142 |
| 33. | NC_016498 | GGTTTT | 3 | 340335 | 340353 | 19 | 0.00% | 66.67% | 33.33% | 0.00% | 366996142 |
| 34. | NC_016498 | CAAGAT | 3 | 348900 | 348917 | 18 | 50.00% | 16.67% | 16.67% | 16.67% | 366996150 |
| 35. | NC_016498 | GGTTCT | 5 | 349374 | 349403 | 30 | 0.00% | 50.00% | 33.33% | 16.67% | 366996152 |
| 36. | NC_016498 | TACATA | 3 | 351365 | 351382 | 18 | 50.00% | 33.33% | 0.00% | 16.67% | Non-Coding |
| 37. | NC_016498 | GATTTA | 4 | 373385 | 373408 | 24 | 33.33% | 50.00% | 16.67% | 0.00% | 366996176 |
| 38. | NC_016498 | TTGAAC | 4 | 427626 | 427649 | 24 | 33.33% | 33.33% | 16.67% | 16.67% | 366996226 |
| 39. | NC_016498 | ACTTGA | 3 | 427672 | 427689 | 18 | 33.33% | 33.33% | 16.67% | 16.67% | 366996226 |
| 40. | NC_016498 | AGAACT | 7 | 427681 | 427722 | 42 | 50.00% | 16.67% | 16.67% | 16.67% | 366996226 |
| 41. | NC_016498 | ACTTGA | 3 | 427768 | 427785 | 18 | 33.33% | 33.33% | 16.67% | 16.67% | 366996226 |
| 42. | NC_016498 | CATCCT | 4 | 446859 | 446882 | 24 | 16.67% | 33.33% | 0.00% | 50.00% | 366996242 |
| 43. | NC_016498 | TGAGGA | 3 | 477476 | 477494 | 19 | 33.33% | 16.67% | 50.00% | 0.00% | Non-Coding |
| 44. | NC_016498 | GATGAA | 4 | 507956 | 507978 | 23 | 50.00% | 16.67% | 33.33% | 0.00% | 366996298 |
| 45. | NC_016498 | ACCAGC | 3 | 516831 | 516848 | 18 | 33.33% | 0.00% | 16.67% | 50.00% | 366996310 |
| 46. | NC_016498 | TCATCT | 4 | 519001 | 519024 | 24 | 16.67% | 50.00% | 0.00% | 33.33% | 366996310 |
| 47. | NC_016498 | GGTTCT | 3 | 522659 | 522676 | 18 | 0.00% | 50.00% | 33.33% | 16.67% | 366996316 |
| 48. | NC_016498 | CATTCA | 3 | 524739 | 524756 | 18 | 33.33% | 33.33% | 0.00% | 33.33% | 366996320 |
| 49. | NC_016498 | TCAGAA | 3 | 556810 | 556827 | 18 | 50.00% | 16.67% | 16.67% | 16.67% | 366996356 |
| 50. | NC_016498 | ACTCTG | 3 | 557234 | 557251 | 18 | 16.67% | 33.33% | 16.67% | 33.33% | 366996356 |
| 51. | NC_016498 | GACGAT | 5 | 562590 | 562619 | 30 | 33.33% | 16.67% | 33.33% | 16.67% | 366996362 |
| 52. | NC_016498 | TCATCT | 3 | 568302 | 568318 | 17 | 16.67% | 50.00% | 0.00% | 33.33% | Non-Coding |
| 53. | NC_016498 | AGGTGC | 3 | 573199 | 573216 | 18 | 16.67% | 16.67% | 50.00% | 16.67% | 366996374 |
| 54. | NC_016498 | CAGGCG | 4 | 573216 | 573239 | 24 | 16.67% | 0.00% | 50.00% | 33.33% | 366996374 |
| 55. | NC_016498 | TCATTG | 3 | 594102 | 594125 | 24 | 16.67% | 50.00% | 16.67% | 16.67% | 366996404 |
| 56. | NC_016498 | GGTTCC | 3 | 596047 | 596064 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 366996406 |
| 57. | NC_016498 | TGAAGA | 4 | 603471 | 603494 | 24 | 50.00% | 16.67% | 33.33% | 0.00% | 366996416 |
| 58. | NC_016498 | TTTTCT | 4 | 604669 | 604692 | 24 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 59. | NC_016498 | CTTGCT | 4 | 609071 | 609094 | 24 | 0.00% | 50.00% | 16.67% | 33.33% | Non-Coding |
| 60. | NC_016498 | TTGTCG | 3 | 617942 | 617959 | 18 | 0.00% | 50.00% | 33.33% | 16.67% | 366996430 |
| 61. | NC_016498 | ATGCTA | 3 | 622526 | 622543 | 18 | 33.33% | 33.33% | 16.67% | 16.67% | 366996436 |
| 62. | NC_016498 | ATTGGA | 4 | 643390 | 643413 | 24 | 33.33% | 33.33% | 33.33% | 0.00% | 366996464 |
| 63. | NC_016498 | AAATTA | 3 | 668357 | 668374 | 18 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 64. | NC_016498 | ATTATC | 3 | 685571 | 685588 | 18 | 33.33% | 50.00% | 0.00% | 16.67% | 366996506 |