List of
Imperfect Penta
-nucleotide repeats in Naumovozyma castellii CBS 4309
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_016496 | GATCG | 3 | 4905 | 4918 | 14 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 2. | NC_016496 | TTTTG | 3 | 25109 | 25122 | 14 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 3. | NC_016496 | ATGGA | 3 | 29346 | 29360 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | 366994190 |
| 4. | NC_016496 | TTCTT | 3 | 42447 | 42461 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 5. | NC_016496 | TTTGT | 3 | 42747 | 42761 | 15 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 6. | NC_016496 | TGATC | 4 | 61100 | 61119 | 20 | 20.00% | 40.00% | 20.00% | 20.00% | 366994224 |
| 7. | NC_016496 | TGGAG | 4 | 61149 | 61168 | 20 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 8. | NC_016496 | CACTA | 3 | 66865 | 66879 | 15 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |
| 9. | NC_016496 | ATATG | 4 | 78819 | 78843 | 25 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 10. | NC_016496 | AGATG | 5 | 79709 | 79733 | 25 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 11. | NC_016496 | ATACA | 4 | 103328 | 103347 | 20 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 12. | NC_016496 | TGTTT | 4 | 121675 | 121694 | 20 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 13. | NC_016496 | AAATA | 3 | 125966 | 125979 | 14 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 14. | NC_016496 | TTGTT | 5 | 133458 | 133482 | 25 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 15. | NC_016496 | TTATA | 3 | 140571 | 140584 | 14 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 16. | NC_016496 | CATCT | 3 | 143121 | 143135 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 17. | NC_016496 | ATTAA | 5 | 149738 | 149762 | 25 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 18. | NC_016496 | TTTGT | 3 | 178980 | 178994 | 15 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 19. | NC_016496 | TTGTT | 5 | 183066 | 183090 | 25 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 20. | NC_016496 | AAGAG | 3 | 206967 | 206980 | 14 | 60.00% | 0.00% | 40.00% | 0.00% | 366994360 |
| 21. | NC_016496 | TCAAT | 3 | 235797 | 235810 | 14 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 22. | NC_016496 | CAGCA | 3 | 236070 | 236083 | 14 | 40.00% | 0.00% | 20.00% | 40.00% | 366994392 |
| 23. | NC_016496 | AATAT | 4 | 247913 | 247932 | 20 | 60.00% | 40.00% | 0.00% | 0.00% | 366994404 |
| 24. | NC_016496 | AGATG | 4 | 252236 | 252256 | 21 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 25. | NC_016496 | AAAAT | 3 | 277313 | 277326 | 14 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 26. | NC_016496 | GTAAA | 3 | 291834 | 291848 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | 366994442 |
| 27. | NC_016496 | TTGCT | 4 | 303184 | 303204 | 21 | 0.00% | 60.00% | 20.00% | 20.00% | 366994452 |
| 28. | NC_016496 | ATCAA | 3 | 314290 | 314303 | 14 | 60.00% | 20.00% | 0.00% | 20.00% | 366994466 |
| 29. | NC_016496 | TAATA | 4 | 329647 | 329667 | 21 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 30. | NC_016496 | AATAA | 5 | 336946 | 336970 | 25 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 31. | NC_016496 | AACTG | 3 | 360891 | 360905 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 32. | NC_016496 | GAAAG | 3 | 370396 | 370410 | 15 | 60.00% | 0.00% | 40.00% | 0.00% | 366994518 |
| 33. | NC_016496 | GTTTT | 3 | 410446 | 410459 | 14 | 0.00% | 80.00% | 20.00% | 0.00% | 366994560 |
| 34. | NC_016496 | CTGAT | 3 | 430179 | 430193 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 35. | NC_016496 | CTCAT | 3 | 450811 | 450825 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | 366994602 |
| 36. | NC_016496 | CTCAT | 5 | 455363 | 455387 | 25 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 37. | NC_016496 | ATTTT | 3 | 502469 | 502484 | 16 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 38. | NC_016496 | TTTTA | 3 | 502849 | 502862 | 14 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 39. | NC_016496 | TAGAA | 3 | 528669 | 528682 | 14 | 60.00% | 20.00% | 20.00% | 0.00% | 366994672 |
| 40. | NC_016496 | TAGCA | 4 | 534316 | 534336 | 21 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 41. | NC_016496 | CTCTT | 5 | 534638 | 534662 | 25 | 0.00% | 60.00% | 0.00% | 40.00% | Non-Coding |
| 42. | NC_016496 | ACTAT | 4 | 564234 | 564253 | 20 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 43. | NC_016496 | ATATT | 3 | 578683 | 578696 | 14 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 44. | NC_016496 | CATTA | 3 | 592895 | 592909 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 45. | NC_016496 | GTGTT | 3 | 593538 | 593552 | 15 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 46. | NC_016496 | TCATC | 4 | 605856 | 605880 | 25 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 47. | NC_016496 | TGAAA | 3 | 649516 | 649529 | 14 | 60.00% | 20.00% | 20.00% | 0.00% | 366994784 |
| 48. | NC_016496 | ATAGC | 5 | 651103 | 651127 | 25 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 49. | NC_016496 | AATTA | 3 | 671852 | 671865 | 14 | 60.00% | 40.00% | 0.00% | 0.00% | 366994810 |
| 50. | NC_016496 | ATTTC | 3 | 696280 | 696293 | 14 | 20.00% | 60.00% | 0.00% | 20.00% | 366994840 |
| 51. | NC_016496 | CTCAT | 5 | 702399 | 702424 | 26 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 52. | NC_016496 | ATTTA | 5 | 711192 | 711215 | 24 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 53. | NC_016496 | TTTTG | 6 | 722154 | 722184 | 31 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 54. | NC_016496 | AGACA | 3 | 726059 | 726072 | 14 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 55. | NC_016496 | CGTCT | 5 | 728748 | 728771 | 24 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 56. | NC_016496 | CTGTT | 5 | 729098 | 729122 | 25 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 57. | NC_016496 | TTGTT | 3 | 735600 | 735613 | 14 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 58. | NC_016496 | TACTT | 3 | 740015 | 740029 | 15 | 20.00% | 60.00% | 0.00% | 20.00% | 366994882 |
| 59. | NC_016496 | ATGAG | 6 | 750562 | 750591 | 30 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 60. | NC_016496 | CTTGA | 3 | 750593 | 750607 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 61. | NC_016496 | ATTAT | 8 | 753563 | 753601 | 39 | 40.00% | 60.00% | 0.00% | 0.00% | 366994896 |
| 62. | NC_016496 | ACAAT | 4 | 764722 | 764746 | 25 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 63. | NC_016496 | TCCAC | 3 | 785665 | 785679 | 15 | 20.00% | 20.00% | 0.00% | 60.00% | 366994928 |
| 64. | NC_016496 | TTATG | 3 | 815651 | 815665 | 15 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 65. | NC_016496 | ATTTT | 3 | 821241 | 821255 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |