List of
Imperfect Penta
-nucleotide repeats in Naumovozyma castellii CBS 4309
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_016494 | GATCA | 3 | 16758 | 16772 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 2. | NC_016494 | TGTTT | 3 | 34906 | 34919 | 14 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 3. | NC_016494 | AAAAT | 4 | 41880 | 41899 | 20 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 4. | NC_016494 | CAAAT | 3 | 62363 | 62376 | 14 | 60.00% | 20.00% | 0.00% | 20.00% | 366992440 |
| 5. | NC_016494 | TGGTT | 3 | 63738 | 63752 | 15 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 6. | NC_016494 | AATGC | 3 | 80188 | 80201 | 14 | 40.00% | 20.00% | 20.00% | 20.00% | 366992464 |
| 7. | NC_016494 | GAAAA | 4 | 81896 | 81915 | 20 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 8. | NC_016494 | ATTTT | 3 | 92137 | 92151 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | 366992470 |
| 9. | NC_016494 | AATAA | 3 | 114424 | 114437 | 14 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 10. | NC_016494 | ATAAT | 3 | 181771 | 181784 | 14 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 11. | NC_016494 | TTTTA | 3 | 192690 | 192703 | 14 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 12. | NC_016494 | AAATT | 3 | 212328 | 212342 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | 366992588 |
| 13. | NC_016494 | ATGAG | 5 | 227457 | 227481 | 25 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 14. | NC_016494 | AAATA | 5 | 229486 | 229510 | 25 | 80.00% | 20.00% | 0.00% | 0.00% | 366992608 |
| 15. | NC_016494 | TCTAT | 4 | 236444 | 236463 | 20 | 20.00% | 60.00% | 0.00% | 20.00% | 366992618 |
| 16. | NC_016494 | GAGAT | 3 | 248730 | 248744 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 17. | NC_016494 | TGTTT | 5 | 275550 | 275574 | 25 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 18. | NC_016494 | ATTTT | 3 | 278315 | 278328 | 14 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 19. | NC_016494 | ATTCA | 3 | 289180 | 289194 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 20. | NC_016494 | ATGCA | 3 | 304973 | 304987 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 21. | NC_016494 | AATAT | 3 | 328095 | 328108 | 14 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 22. | NC_016494 | AATTG | 4 | 340543 | 340562 | 20 | 40.00% | 40.00% | 20.00% | 0.00% | 366992724 |
| 23. | NC_016494 | TGATT | 3 | 355366 | 355379 | 14 | 20.00% | 60.00% | 20.00% | 0.00% | 366992742 |
| 24. | NC_016494 | GAAAT | 3 | 372451 | 372466 | 16 | 60.00% | 20.00% | 20.00% | 0.00% | 366992758 |
| 25. | NC_016494 | TATAG | 5 | 372949 | 372972 | 24 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 26. | NC_016494 | CTCAT | 3 | 376255 | 376269 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 27. | NC_016494 | TTCTT | 3 | 439067 | 439080 | 14 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 28. | NC_016494 | AAATA | 3 | 441906 | 441919 | 14 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 29. | NC_016494 | TTTAT | 4 | 460800 | 460819 | 20 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 30. | NC_016494 | GTATT | 4 | 464811 | 464830 | 20 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 31. | NC_016494 | AATAC | 3 | 489524 | 489538 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | 366992866 |
| 32. | NC_016494 | AAATG | 3 | 498562 | 498576 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 33. | NC_016494 | GACTC | 3 | 503550 | 503563 | 14 | 20.00% | 20.00% | 20.00% | 40.00% | 366992876 |
| 34. | NC_016494 | ATCTC | 6 | 506168 | 506197 | 30 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 35. | NC_016494 | TGTAT | 3 | 519836 | 519850 | 15 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 36. | NC_016494 | AAAGG | 3 | 525072 | 525086 | 15 | 60.00% | 0.00% | 40.00% | 0.00% | Non-Coding |
| 37. | NC_016494 | ATAAC | 3 | 559112 | 559126 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | 366992942 |
| 38. | NC_016494 | GAGAT | 5 | 560007 | 560031 | 25 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 39. | NC_016494 | AAAAC | 4 | 573475 | 573494 | 20 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 40. | NC_016494 | TAGTC | 6 | 595789 | 595822 | 34 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 41. | NC_016494 | AATAT | 6 | 604463 | 604492 | 30 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 42. | NC_016494 | ATATT | 3 | 629031 | 629045 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 43. | NC_016494 | CAAAG | 3 | 662332 | 662346 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 44. | NC_016494 | TGCTC | 3 | 664120 | 664134 | 15 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 45. | NC_016494 | GAAAA | 3 | 681021 | 681036 | 16 | 80.00% | 0.00% | 20.00% | 0.00% | 366993082 |
| 46. | NC_016494 | GAAAT | 3 | 698596 | 698610 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 47. | NC_016494 | ACTTC | 4 | 705120 | 705139 | 20 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 48. | NC_016494 | TGCAT | 3 | 715759 | 715773 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 49. | NC_016494 | TTGCA | 3 | 727273 | 727286 | 14 | 20.00% | 40.00% | 20.00% | 20.00% | 366993134 |
| 50. | NC_016494 | TATAA | 3 | 727534 | 727548 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 51. | NC_016494 | GAAAA | 3 | 732443 | 732458 | 16 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 52. | NC_016494 | AGTTT | 3 | 745359 | 745372 | 14 | 20.00% | 60.00% | 20.00% | 0.00% | 366993150 |
| 53. | NC_016494 | ATCTC | 3 | 766499 | 766512 | 14 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 54. | NC_016494 | AATTC | 3 | 777925 | 777939 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 55. | NC_016494 | ACACA | 3 | 807700 | 807713 | 14 | 60.00% | 0.00% | 0.00% | 40.00% | Non-Coding |
| 56. | NC_016494 | AATAT | 3 | 820466 | 820479 | 14 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 57. | NC_016494 | TCTGT | 3 | 821660 | 821674 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | 366993222 |
| 58. | NC_016494 | CATTA | 3 | 829049 | 829062 | 14 | 40.00% | 40.00% | 0.00% | 20.00% | 366993230 |
| 59. | NC_016494 | ATACC | 3 | 829585 | 829598 | 14 | 40.00% | 20.00% | 0.00% | 40.00% | 366993230 |
| 60. | NC_016494 | AGACA | 5 | 836479 | 836503 | 25 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 61. | NC_016494 | GTTAC | 4 | 836538 | 836557 | 20 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 62. | NC_016494 | CAAGA | 3 | 858691 | 858704 | 14 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 63. | NC_016494 | AAAAT | 3 | 862384 | 862399 | 16 | 80.00% | 20.00% | 0.00% | 0.00% | 366993262 |
| 64. | NC_016494 | AGCAT | 4 | 871563 | 871582 | 20 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 65. | NC_016494 | CTAAA | 4 | 883524 | 883543 | 20 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 66. | NC_016494 | AAAAT | 4 | 885666 | 885685 | 20 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 67. | NC_016494 | AAATG | 3 | 889549 | 889562 | 14 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 68. | NC_016494 | ACTTG | 3 | 908706 | 908720 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | 366993300 |
| 69. | NC_016494 | GTTTA | 3 | 937864 | 937879 | 16 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 70. | NC_016494 | GGTAT | 3 | 945278 | 945293 | 16 | 20.00% | 40.00% | 40.00% | 0.00% | 366993338 |