List of
Imperfect Penta
-nucleotide repeats in Naumovozyma castellii CBS 4309
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_016493 | CCTTA | 7 | 11306 | 11340 | 35 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 2. | NC_016493 | TTACA | 3 | 11806 | 11820 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 3. | NC_016493 | AATGA | 3 | 20909 | 20922 | 14 | 60.00% | 20.00% | 20.00% | 0.00% | 366991229 |
| 4. | NC_016493 | GATAA | 3 | 22946 | 22959 | 14 | 60.00% | 20.00% | 20.00% | 0.00% | 366991231 |
| 5. | NC_016493 | TCAAC | 3 | 30289 | 30302 | 14 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |
| 6. | NC_016493 | AATAC | 6 | 34847 | 34877 | 31 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 7. | NC_016493 | GATGA | 3 | 55876 | 55889 | 14 | 40.00% | 20.00% | 40.00% | 0.00% | 366991261 |
| 8. | NC_016493 | AATGG | 4 | 69712 | 69731 | 20 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 9. | NC_016493 | ATCTC | 5 | 70114 | 70138 | 25 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 10. | NC_016493 | TTATT | 3 | 72941 | 72955 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 11. | NC_016493 | GTTTT | 3 | 103184 | 103197 | 14 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 12. | NC_016493 | AAGAC | 3 | 103581 | 103594 | 14 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 13. | NC_016493 | ACTTC | 3 | 104285 | 104299 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | 366991319 |
| 14. | NC_016493 | AACCC | 3 | 104808 | 104822 | 15 | 40.00% | 0.00% | 0.00% | 60.00% | 366991319 |
| 15. | NC_016493 | CAATT | 3 | 105417 | 105430 | 14 | 40.00% | 40.00% | 0.00% | 20.00% | 366991319 |
| 16. | NC_016493 | ATAGA | 6 | 105996 | 106025 | 30 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 17. | NC_016493 | GTTGT | 4 | 109636 | 109656 | 21 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 18. | NC_016493 | AAATT | 3 | 115472 | 115486 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | 366991325 |
| 19. | NC_016493 | GATAA | 3 | 130194 | 130208 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 20. | NC_016493 | GAAGT | 3 | 133178 | 133191 | 14 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 21. | NC_016493 | TAAAA | 4 | 144443 | 144462 | 20 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 22. | NC_016493 | ATAGT | 4 | 146844 | 146863 | 20 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 23. | NC_016493 | CTAAT | 3 | 154495 | 154509 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | 366991359 |
| 24. | NC_016493 | AAAGA | 3 | 159308 | 159321 | 14 | 80.00% | 0.00% | 20.00% | 0.00% | 366991363 |
| 25. | NC_016493 | GGGAA | 3 | 170817 | 170831 | 15 | 40.00% | 0.00% | 60.00% | 0.00% | 366991369 |
| 26. | NC_016493 | ATCTG | 3 | 207555 | 207568 | 14 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 27. | NC_016493 | ACAGA | 3 | 218781 | 218795 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 28. | NC_016493 | AGATC | 3 | 221487 | 221500 | 14 | 40.00% | 20.00% | 20.00% | 20.00% | 366991419 |
| 29. | NC_016493 | ACTTC | 3 | 225857 | 225871 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 30. | NC_016493 | GAAAA | 4 | 229288 | 229307 | 20 | 80.00% | 0.00% | 20.00% | 0.00% | 366991431 |
| 31. | NC_016493 | GTGCG | 3 | 246534 | 246548 | 15 | 0.00% | 20.00% | 60.00% | 20.00% | 366991451 |
| 32. | NC_016493 | ATCTC | 3 | 270656 | 270670 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 33. | NC_016493 | AAAGA | 3 | 293772 | 293785 | 14 | 80.00% | 0.00% | 20.00% | 0.00% | 366991501 |
| 34. | NC_016493 | CAAGA | 3 | 300823 | 300836 | 14 | 60.00% | 0.00% | 20.00% | 20.00% | 366991507 |
| 35. | NC_016493 | ATTAT | 3 | 341859 | 341873 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | 366991547 |
| 36. | NC_016493 | TTTAT | 5 | 342152 | 342176 | 25 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 37. | NC_016493 | TTCTT | 3 | 356846 | 356861 | 16 | 0.00% | 80.00% | 0.00% | 20.00% | 366991569 |
| 38. | NC_016493 | TGTGT | 5 | 383160 | 383184 | 25 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 39. | NC_016493 | GAGAT | 7 | 406135 | 406169 | 35 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 40. | NC_016493 | TTATT | 3 | 428228 | 428241 | 14 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 41. | NC_016493 | TTGGC | 3 | 428592 | 428606 | 15 | 0.00% | 40.00% | 40.00% | 20.00% | Non-Coding |
| 42. | NC_016493 | AATTC | 3 | 437985 | 437998 | 14 | 40.00% | 40.00% | 0.00% | 20.00% | 366991647 |
| 43. | NC_016493 | ATACA | 3 | 444123 | 444136 | 14 | 60.00% | 20.00% | 0.00% | 20.00% | 366991655 |
| 44. | NC_016493 | AAAAT | 3 | 446605 | 446620 | 16 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 45. | NC_016493 | CTTCA | 3 | 461279 | 461292 | 14 | 20.00% | 40.00% | 0.00% | 40.00% | 366991675 |
| 46. | NC_016493 | GTTCT | 3 | 500520 | 500534 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 47. | NC_016493 | ATGAG | 5 | 508347 | 508371 | 25 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 48. | NC_016493 | TCAAA | 3 | 516356 | 516369 | 14 | 60.00% | 20.00% | 0.00% | 20.00% | 366991729 |
| 49. | NC_016493 | AAAGA | 3 | 519520 | 519533 | 14 | 80.00% | 0.00% | 20.00% | 0.00% | 366991733 |
| 50. | NC_016493 | GTTTT | 4 | 566195 | 566214 | 20 | 0.00% | 80.00% | 20.00% | 0.00% | 366991781 |
| 51. | NC_016493 | AGTAA | 3 | 622191 | 622205 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 52. | NC_016493 | CTTAT | 3 | 622398 | 622412 | 15 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 53. | NC_016493 | TTCAA | 3 | 639743 | 639757 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | 366991829 |
| 54. | NC_016493 | TCTTT | 4 | 642040 | 642058 | 19 | 0.00% | 80.00% | 0.00% | 20.00% | 366991831 |
| 55. | NC_016493 | TATCA | 3 | 647494 | 647508 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 56. | NC_016493 | TTCTT | 3 | 667239 | 667252 | 14 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 57. | NC_016493 | TTTAT | 3 | 667440 | 667454 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 58. | NC_016493 | AAAAT | 5 | 668720 | 668744 | 25 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 59. | NC_016493 | AAATT | 3 | 672668 | 672682 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | 366991865 |
| 60. | NC_016493 | TTAAT | 3 | 687384 | 687397 | 14 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 61. | NC_016493 | CCAAT | 3 | 688204 | 688217 | 14 | 40.00% | 20.00% | 0.00% | 40.00% | 366991867 |
| 62. | NC_016493 | AATCA | 3 | 707232 | 707245 | 14 | 60.00% | 20.00% | 0.00% | 20.00% | 366991887 |
| 63. | NC_016493 | GATAG | 3 | 720904 | 720918 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | 366991899 |
| 64. | NC_016493 | GAATA | 3 | 728044 | 728058 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 65. | NC_016493 | ATTTT | 3 | 753597 | 753610 | 14 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 66. | NC_016493 | TTTGG | 3 | 754276 | 754291 | 16 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 67. | NC_016493 | AATTC | 3 | 760256 | 760269 | 14 | 40.00% | 40.00% | 0.00% | 20.00% | 366991931 |
| 68. | NC_016493 | TATTT | 3 | 766094 | 766108 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 69. | NC_016493 | ATTCA | 3 | 766325 | 766339 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 70. | NC_016493 | AGAGC | 3 | 766692 | 766705 | 14 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 71. | NC_016493 | ATTCT | 3 | 778413 | 778426 | 14 | 20.00% | 60.00% | 0.00% | 20.00% | 366991947 |
| 72. | NC_016493 | AGATT | 3 | 795504 | 795518 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 73. | NC_016493 | AATAG | 4 | 797260 | 797279 | 20 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 74. | NC_016493 | CTTCT | 4 | 800828 | 800847 | 20 | 0.00% | 60.00% | 0.00% | 40.00% | Non-Coding |
| 75. | NC_016493 | AAAAT | 3 | 801269 | 801283 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 76. | NC_016493 | CATTT | 3 | 822851 | 822864 | 14 | 20.00% | 60.00% | 0.00% | 20.00% | 366991985 |
| 77. | NC_016493 | GAAAG | 3 | 839070 | 839083 | 14 | 60.00% | 0.00% | 40.00% | 0.00% | 366991999 |
| 78. | NC_016493 | ATATT | 3 | 876404 | 876418 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 79. | NC_016493 | GCAAG | 12 | 879617 | 879676 | 60 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 80. | NC_016493 | CAATC | 3 | 880246 | 880259 | 14 | 40.00% | 20.00% | 0.00% | 40.00% | 366992029 |
| 81. | NC_016493 | GACGA | 5 | 883418 | 883442 | 25 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 82. | NC_016493 | CAGAG | 5 | 883446 | 883470 | 25 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 83. | NC_016493 | ATACA | 6 | 886584 | 886614 | 31 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 84. | NC_016493 | TAATA | 3 | 904883 | 904897 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 85. | NC_016493 | GATTA | 4 | 929873 | 929891 | 19 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 86. | NC_016493 | AGAGG | 3 | 933992 | 934005 | 14 | 40.00% | 0.00% | 60.00% | 0.00% | Non-Coding |
| 87. | NC_016493 | ATGAG | 3 | 939422 | 939436 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 88. | NC_016493 | ATTCA | 3 | 980030 | 980044 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 89. | NC_016493 | ATGAT | 3 | 988283 | 988296 | 14 | 40.00% | 40.00% | 20.00% | 0.00% | 366992145 |
| 90. | NC_016493 | GCAGT | 3 | 991050 | 991065 | 16 | 20.00% | 20.00% | 40.00% | 20.00% | 366992147 |
| 91. | NC_016493 | GCACA | 4 | 991466 | 991485 | 20 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |
| 92. | NC_016493 | TAAAA | 5 | 1020484 | 1020508 | 25 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 93. | NC_016493 | GTTTA | 5 | 1022191 | 1022215 | 25 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 94. | NC_016493 | TTGAG | 4 | 1023897 | 1023916 | 20 | 20.00% | 40.00% | 40.00% | 0.00% | 366992185 |
| 95. | NC_016493 | CATCT | 4 | 1026265 | 1026284 | 20 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 96. | NC_016493 | TAGCA | 4 | 1026287 | 1026306 | 20 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 97. | NC_016493 | AGATG | 5 | 1037085 | 1037109 | 25 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 98. | NC_016493 | AATTG | 3 | 1047503 | 1047516 | 14 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 99. | NC_016493 | CTATG | 3 | 1056827 | 1056841 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 100. | NC_016493 | TCTTG | 3 | 1064292 | 1064305 | 14 | 0.00% | 60.00% | 20.00% | 20.00% | 366992223 |
| 101. | NC_016493 | TTCCT | 3 | 1161924 | 1161937 | 14 | 0.00% | 60.00% | 0.00% | 40.00% | Non-Coding |
| 102. | NC_016493 | GATCG | 3 | 1168977 | 1168990 | 14 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 103. | NC_016493 | AATTT | 3 | 1181453 | 1181466 | 14 | 40.00% | 60.00% | 0.00% | 0.00% | 366992327 |
| 104. | NC_016493 | TGATA | 5 | 1188308 | 1188332 | 25 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 105. | NC_016493 | AAAAG | 4 | 1218881 | 1218900 | 20 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |