List of
Perfect Penta
-nucleotide repeats in Myceliophthora thermophila ATCC 42464
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_016475 | TTCTC | 3 | 256791 | 256805 | 15 | 0.00% | 60.00% | 0.00% | 40.00% | Non-Coding |
| 2. | NC_016475 | GTAGG | 3 | 427392 | 427406 | 15 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 3. | NC_016475 | TCCTC | 3 | 486695 | 486709 | 15 | 0.00% | 40.00% | 0.00% | 60.00% | Non-Coding |
| 4. | NC_016475 | TCCTC | 3 | 519907 | 519921 | 15 | 0.00% | 40.00% | 0.00% | 60.00% | Non-Coding |
| 5. | NC_016475 | CCTAC | 3 | 548498 | 548512 | 15 | 20.00% | 20.00% | 0.00% | 60.00% | Non-Coding |
| 6. | NC_016475 | GTAGT | 3 | 708939 | 708953 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 7. | NC_016475 | AAGCA | 3 | 714898 | 714912 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 8. | NC_016475 | GGACA | 3 | 744787 | 744801 | 15 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 9. | NC_016475 | TTCTT | 5 | 766352 | 766376 | 25 | 0.00% | 80.00% | 0.00% | 20.00% | 367029057 |
| 10. | NC_016475 | ATCTG | 3 | 770822 | 770836 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 11. | NC_016475 | CAAAA | 3 | 816867 | 816881 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 12. | NC_016475 | TCTTT | 6 | 1131403 | 1131432 | 30 | 0.00% | 80.00% | 0.00% | 20.00% | 367029201 |
| 13. | NC_016475 | CCTCT | 3 | 1202244 | 1202258 | 15 | 0.00% | 40.00% | 0.00% | 60.00% | Non-Coding |
| 14. | NC_016475 | GTTTT | 7 | 1229379 | 1229413 | 35 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 15. | NC_016475 | AGAAA | 3 | 1241535 | 1241549 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 16. | NC_016475 | GAGCG | 3 | 1242069 | 1242083 | 15 | 20.00% | 0.00% | 60.00% | 20.00% | Non-Coding |
| 17. | NC_016475 | CGAGC | 3 | 1324378 | 1324392 | 15 | 20.00% | 0.00% | 40.00% | 40.00% | Non-Coding |
| 18. | NC_016475 | GTCTT | 3 | 1477744 | 1477758 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 19. | NC_016475 | CTTTT | 3 | 1524393 | 1524407 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | 367029375 |
| 20. | NC_016475 | AGGCC | 3 | 1612077 | 1612091 | 15 | 20.00% | 0.00% | 40.00% | 40.00% | Non-Coding |
| 21. | NC_016475 | ACCAA | 4 | 1615018 | 1615037 | 20 | 60.00% | 0.00% | 0.00% | 40.00% | Non-Coding |
| 22. | NC_016475 | TGTGC | 3 | 1765672 | 1765686 | 15 | 0.00% | 40.00% | 40.00% | 20.00% | Non-Coding |
| 23. | NC_016475 | GATCG | 3 | 1826423 | 1826437 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 24. | NC_016475 | ATGGC | 3 | 1852704 | 1852718 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 25. | NC_016475 | GCGGT | 5 | 1852719 | 1852743 | 25 | 0.00% | 20.00% | 60.00% | 20.00% | Non-Coding |
| 26. | NC_016475 | ATAAA | 3 | 1880624 | 1880638 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 27. | NC_016475 | GAAAA | 5 | 2017336 | 2017360 | 25 | 80.00% | 0.00% | 20.00% | 0.00% | 367029613 |
| 28. | NC_016475 | ACAAA | 3 | 2098274 | 2098288 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 29. | NC_016475 | GAAAA | 4 | 2106188 | 2106207 | 20 | 80.00% | 0.00% | 20.00% | 0.00% | 367029671 |
| 30. | NC_016475 | TTCCG | 3 | 2200886 | 2200900 | 15 | 0.00% | 40.00% | 20.00% | 40.00% | 367029727 |
| 31. | NC_016475 | GAAGG | 3 | 2225308 | 2225322 | 15 | 40.00% | 0.00% | 60.00% | 0.00% | Non-Coding |
| 32. | NC_016475 | GAAAA | 3 | 2228745 | 2228759 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 33. | NC_016475 | AAAAG | 3 | 2241013 | 2241027 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 34. | NC_016475 | TGTAC | 3 | 2365911 | 2365925 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 35. | NC_016475 | CCTTC | 3 | 2396903 | 2396917 | 15 | 0.00% | 40.00% | 0.00% | 60.00% | 367029831 |
| 36. | NC_016475 | TGTAG | 3 | 2407738 | 2407752 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 37. | NC_016475 | TCTTT | 3 | 2421218 | 2421232 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | 367029845 |
| 38. | NC_016475 | TTTTC | 3 | 2426832 | 2426846 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 39. | NC_016475 | TCCCA | 3 | 2445932 | 2445946 | 15 | 20.00% | 20.00% | 0.00% | 60.00% | 367029859 |
| 40. | NC_016475 | CGGTC | 4 | 2524858 | 2524877 | 20 | 0.00% | 20.00% | 40.00% | 40.00% | Non-Coding |
| 41. | NC_016475 | ATTTT | 3 | 2591026 | 2591040 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 42. | NC_016475 | TTTAT | 3 | 2591043 | 2591057 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 43. | NC_016475 | GCACC | 3 | 2613936 | 2613950 | 15 | 20.00% | 0.00% | 20.00% | 60.00% | 367029951 |
| 44. | NC_016475 | TCTCT | 3 | 2626034 | 2626048 | 15 | 0.00% | 60.00% | 0.00% | 40.00% | 367029959 |
| 45. | NC_016475 | GATGG | 4 | 2636541 | 2636560 | 20 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 46. | NC_016475 | CCATC | 3 | 2637432 | 2637446 | 15 | 20.00% | 20.00% | 0.00% | 60.00% | Non-Coding |
| 47. | NC_016475 | AGAAA | 3 | 2674364 | 2674378 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 48. | NC_016475 | GAGAC | 3 | 2678324 | 2678338 | 15 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 49. | NC_016475 | TTTTC | 3 | 2831008 | 2831022 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 50. | NC_016475 | TTCTT | 3 | 2831025 | 2831039 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 51. | NC_016475 | TAGTG | 7 | 2837301 | 2837335 | 35 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 52. | NC_016475 | GTACA | 4 | 2859477 | 2859496 | 20 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 53. | NC_016475 | TGGAG | 3 | 2863205 | 2863219 | 15 | 20.00% | 20.00% | 60.00% | 0.00% | 367030073 |
| 54. | NC_016475 | CGGAT | 3 | 2890453 | 2890467 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 55. | NC_016475 | TGTAC | 3 | 2999837 | 2999851 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 56. | NC_016475 | CCGCG | 3 | 3007008 | 3007022 | 15 | 0.00% | 0.00% | 40.00% | 60.00% | 367030133 |
| 57. | NC_016475 | CACAC | 3 | 3024709 | 3024723 | 15 | 40.00% | 0.00% | 0.00% | 60.00% | Non-Coding |
| 58. | NC_016475 | TACCT | 3 | 3084422 | 3084436 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 59. | NC_016475 | AGACC | 3 | 3178761 | 3178775 | 15 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |
| 60. | NC_016475 | GTACT | 3 | 3200037 | 3200051 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 61. | NC_016475 | GAAGA | 3 | 3252213 | 3252227 | 15 | 60.00% | 0.00% | 40.00% | 0.00% | Non-Coding |
| 62. | NC_016475 | TAAGC | 3 | 3428168 | 3428182 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 63. | NC_016475 | TTAGC | 3 | 3516396 | 3516410 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 64. | NC_016475 | CCCCA | 3 | 3534503 | 3534517 | 15 | 20.00% | 0.00% | 0.00% | 80.00% | Non-Coding |
| 65. | NC_016475 | GGATG | 3 | 3621411 | 3621425 | 15 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 66. | NC_016475 | TTTTC | 3 | 3624699 | 3624713 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 67. | NC_016475 | CATCT | 3 | 3701322 | 3701336 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 68. | NC_016475 | GCTGG | 3 | 3703778 | 3703792 | 15 | 0.00% | 20.00% | 60.00% | 20.00% | Non-Coding |
| 69. | NC_016475 | AAAGA | 3 | 3716662 | 3716676 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 70. | NC_016475 | TCATT | 3 | 3783072 | 3783086 | 15 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 71. | NC_016475 | GTGCA | 3 | 3816582 | 3816596 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 72. | NC_016475 | GGGGT | 3 | 3889486 | 3889500 | 15 | 0.00% | 20.00% | 80.00% | 0.00% | Non-Coding |
| 73. | NC_016475 | AGACA | 3 | 3912076 | 3912090 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | 367030551 |
| 74. | NC_016475 | AAACA | 5 | 4017419 | 4017443 | 25 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 75. | NC_016475 | TTTCT | 5 | 4079160 | 4079184 | 25 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 76. | NC_016475 | GGGAA | 3 | 4204243 | 4204257 | 15 | 40.00% | 0.00% | 60.00% | 0.00% | 367030689 |
| 77. | NC_016475 | GGGAT | 3 | 4259064 | 4259078 | 15 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 78. | NC_016475 | TACCT | 3 | 4265916 | 4265930 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 79. | NC_016475 | TGTAG | 5 | 4333849 | 4333873 | 25 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 80. | NC_016475 | GTAGG | 3 | 4527750 | 4527764 | 15 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 81. | NC_016475 | TTCCC | 3 | 4584236 | 4584250 | 15 | 0.00% | 40.00% | 0.00% | 60.00% | Non-Coding |
| 82. | NC_016475 | AACAG | 3 | 4618646 | 4618660 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | 367030843 |