List of
Imperfect Penta
-nucleotide repeats in Ashbya gossypii ATCC 10895
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_005788 | TTTAT | 3 | 2073 | 2086 | 14 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NC_005788 | ACAAA | 3 | 11900 | 11913 | 14 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 3. | NC_005788 | CCTGA | 3 | 101826 | 101839 | 14 | 20.00% | 20.00% | 20.00% | 40.00% | 45200771 |
| 4. | NC_005788 | GCAGC | 3 | 134534 | 134549 | 16 | 20.00% | 0.00% | 40.00% | 40.00% | 45200793 |
| 5. | NC_005788 | TTCTC | 3 | 159595 | 159609 | 15 | 0.00% | 60.00% | 0.00% | 40.00% | 45200804 |
| 6. | NC_005788 | CGCGT | 3 | 213942 | 213957 | 16 | 0.00% | 20.00% | 40.00% | 40.00% | Non-Coding |
| 7. | NC_005788 | CAGAG | 3 | 217120 | 217133 | 14 | 40.00% | 0.00% | 40.00% | 20.00% | 45200834 |
| 8. | NC_005788 | GGCGA | 3 | 220387 | 220400 | 14 | 20.00% | 0.00% | 60.00% | 20.00% | Non-Coding |
| 9. | NC_005788 | TCTCA | 3 | 234269 | 234283 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 10. | NC_005788 | CTGGG | 3 | 257280 | 257294 | 15 | 0.00% | 20.00% | 60.00% | 20.00% | 45200860 |
| 11. | NC_005788 | ATACT | 3 | 263800 | 263814 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | 45200864 |
| 12. | NC_005788 | GACCC | 3 | 296009 | 296022 | 14 | 20.00% | 0.00% | 20.00% | 60.00% | 302309192 |
| 13. | NC_005788 | GGCCG | 3 | 370054 | 370068 | 15 | 0.00% | 0.00% | 60.00% | 40.00% | 45200922 |
| 14. | NC_005788 | TTTTC | 3 | 404174 | 404188 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | 45200939 |
| 15. | NC_005788 | GCCGT | 3 | 405752 | 405766 | 15 | 0.00% | 20.00% | 40.00% | 40.00% | 45200940 |
| 16. | NC_005788 | GCTCC | 3 | 415276 | 415290 | 15 | 0.00% | 20.00% | 20.00% | 60.00% | 45200945 |
| 17. | NC_005788 | TTCTC | 3 | 415776 | 415790 | 15 | 0.00% | 60.00% | 0.00% | 40.00% | Non-Coding |
| 18. | NC_005788 | AAATA | 3 | 441714 | 441728 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 19. | NC_005788 | AAATA | 3 | 449911 | 449925 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 20. | NC_005788 | AAATA | 3 | 458108 | 458122 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 21. | NC_005788 | AAATA | 3 | 466305 | 466319 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 22. | NC_005788 | AAATA | 3 | 474502 | 474516 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 23. | NC_005788 | AAATA | 3 | 482699 | 482713 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 24. | NC_005788 | AAATA | 3 | 490896 | 490910 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 25. | NC_005788 | AAATA | 3 | 499093 | 499107 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 26. | NC_005788 | AAATA | 3 | 507290 | 507304 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 27. | NC_005788 | AAATA | 3 | 515487 | 515501 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 28. | NC_005788 | AAATA | 3 | 523684 | 523698 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 29. | NC_005788 | AAATA | 3 | 531881 | 531895 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 30. | NC_005788 | AAATA | 3 | 540078 | 540092 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 31. | NC_005788 | AAATA | 3 | 548275 | 548289 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 32. | NC_005788 | AAATA | 3 | 556472 | 556486 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 33. | NC_005788 | AAATA | 3 | 564669 | 564683 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 34. | NC_005788 | AAATA | 3 | 572866 | 572880 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 35. | NC_005788 | AAATA | 3 | 581063 | 581077 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 36. | NC_005788 | AAATA | 3 | 589260 | 589274 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 37. | NC_005788 | AAATA | 3 | 597457 | 597471 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 38. | NC_005788 | AAATA | 3 | 605654 | 605668 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 39. | NC_005788 | AAATA | 3 | 613851 | 613865 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 40. | NC_005788 | AAATA | 3 | 622048 | 622062 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 41. | NC_005788 | AAATA | 3 | 630245 | 630259 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 42. | NC_005788 | AAATA | 3 | 638442 | 638456 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 43. | NC_005788 | AAATA | 3 | 646639 | 646653 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 44. | NC_005788 | AAATA | 3 | 654836 | 654850 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 45. | NC_005788 | AAATA | 3 | 663033 | 663047 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 46. | NC_005788 | AAATA | 3 | 671230 | 671244 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 47. | NC_005788 | AAATA | 3 | 679427 | 679441 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 48. | NC_005788 | AAATA | 3 | 687624 | 687638 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 49. | NC_005788 | AAATA | 3 | 695821 | 695835 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 50. | NC_005788 | AAATA | 3 | 704018 | 704032 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 51. | NC_005788 | AAATA | 3 | 712215 | 712229 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 52. | NC_005788 | AAATA | 3 | 720412 | 720426 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 53. | NC_005788 | AAATA | 3 | 728609 | 728623 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 54. | NC_005788 | AAATA | 3 | 736806 | 736820 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 55. | NC_005788 | AAATA | 3 | 745003 | 745017 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 56. | NC_005788 | AAATA | 3 | 753200 | 753214 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 57. | NC_005788 | AAATA | 3 | 761397 | 761411 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 58. | NC_005788 | GGCTC | 3 | 879268 | 879281 | 14 | 0.00% | 20.00% | 40.00% | 40.00% | 45201020 |
| 59. | NC_005788 | CGGCG | 3 | 885837 | 885852 | 16 | 0.00% | 0.00% | 60.00% | 40.00% | 302309278 |
| 60. | NC_005788 | GCGCC | 3 | 890684 | 890697 | 14 | 0.00% | 0.00% | 40.00% | 60.00% | 302309284 |
| 61. | NC_005788 | TGCTG | 3 | 909706 | 909719 | 14 | 0.00% | 40.00% | 40.00% | 20.00% | 302309296 |
| 62. | NC_005788 | GGCGC | 3 | 944142 | 944155 | 14 | 0.00% | 0.00% | 60.00% | 40.00% | 45201054 |
| 63. | NC_005788 | TCGGC | 3 | 981835 | 981849 | 15 | 0.00% | 20.00% | 40.00% | 40.00% | 302309317 |
| 64. | NC_005788 | GCTTA | 3 | 993413 | 993427 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | 302309321 |
| 65. | NC_005788 | GATGA | 3 | 1015481 | 1015495 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 66. | NC_005788 | AAAAT | 3 | 1038283 | 1038296 | 14 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 67. | NC_005788 | CTGTA | 3 | 1046700 | 1046713 | 14 | 20.00% | 40.00% | 20.00% | 20.00% | 45201100 |
| 68. | NC_005788 | CGGCG | 3 | 1087968 | 1087982 | 15 | 0.00% | 0.00% | 60.00% | 40.00% | 45201127 |
| 69. | NC_005788 | ACGCT | 3 | 1154000 | 1154013 | 14 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 70. | NC_005788 | GTCGT | 3 | 1154424 | 1154437 | 14 | 0.00% | 40.00% | 40.00% | 20.00% | 302309374 |
| 71. | NC_005788 | GCGGG | 4 | 1201275 | 1201293 | 19 | 0.00% | 0.00% | 80.00% | 20.00% | 45201178 |
| 72. | NC_005788 | GGATA | 3 | 1258344 | 1258358 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 73. | NC_005788 | ACTGG | 3 | 1263815 | 1263828 | 14 | 20.00% | 20.00% | 40.00% | 20.00% | 45201206 |
| 74. | NC_005788 | GCCCC | 3 | 1264339 | 1264353 | 15 | 0.00% | 0.00% | 20.00% | 80.00% | Non-Coding |
| 75. | NC_005788 | CCTTT | 3 | 1325217 | 1325231 | 15 | 0.00% | 60.00% | 0.00% | 40.00% | Non-Coding |
| 76. | NC_005788 | CCGCC | 4 | 1329705 | 1329723 | 19 | 0.00% | 0.00% | 20.00% | 80.00% | 302309414 |
| 77. | NC_005788 | CGCCG | 3 | 1389509 | 1389522 | 14 | 0.00% | 0.00% | 40.00% | 60.00% | 302309433 |
| 78. | NC_005788 | CAGAG | 3 | 1436800 | 1436813 | 14 | 40.00% | 0.00% | 40.00% | 20.00% | 45201290 |
| 79. | NC_005788 | CCATT | 3 | 1499638 | 1499651 | 14 | 20.00% | 40.00% | 0.00% | 40.00% | 302309482 |
| 80. | NC_005788 | ATGGA | 3 | 1567868 | 1567881 | 14 | 40.00% | 20.00% | 40.00% | 0.00% | 302309507 |
| 81. | NC_005788 | AGGGC | 3 | 1575290 | 1575303 | 14 | 20.00% | 0.00% | 60.00% | 20.00% | 45201372 |
| 82. | NC_005788 | TTCTC | 3 | 1594842 | 1594855 | 14 | 0.00% | 60.00% | 0.00% | 40.00% | 45201382 |
| 83. | NC_005788 | GGACT | 3 | 1598892 | 1598906 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | 45201386 |
| 84. | NC_005788 | CGCGC | 3 | 1606192 | 1606206 | 15 | 0.00% | 0.00% | 40.00% | 60.00% | 54299402 |
| 85. | NC_005788 | TAAAT | 3 | 1637750 | 1637763 | 14 | 60.00% | 40.00% | 0.00% | 0.00% | 302309539 |
| 86. | NC_005788 | CGGCG | 3 | 1683698 | 1683712 | 15 | 0.00% | 0.00% | 60.00% | 40.00% | 45201437 |
| 87. | NC_005788 | TTCTC | 3 | 1747732 | 1747745 | 14 | 0.00% | 60.00% | 0.00% | 40.00% | 302309580 |
| 88. | NC_005788 | AGATA | 3 | 1799349 | 1799362 | 14 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |